Gene Aave_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3016 
Symbol 
ID4665497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3325655 
End bp3326632 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID639824218 
Productaldo/keto reductase 
Protein accessionYP_971357 
Protein GI120611679 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.233516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAC GCCCCCTCGG CCGCTCCGGC CTGCAGGTTT CCCCGCTGTG CTTCGGCGGC 
AATGTGTTCG GCTGGACGGT GGACGAGCCG ACCACGTTCT CGCTGATCGA CGCGTGGCTG
GACGCGGGCT TCAACTTCAT CGACACGGCC GATGTCTATT CGCGCTGGAA CCCGGGTCAC
ATGGGGGGCG AATCCGAAGC CCTGATCGGC CAGTGGCTCA AGCGCACCGG CAAGCGGGAC
AGGATCGTGC TCGCCACCAA GGTGGGCAAG GACATGGGCG ACGGCAGGGT CGGCCTGAAG
CCGGACTACA TCCGCCGCGC GGTCGAGGAT TCGCTGCGCC GCCTGCACAC GGACTACATC
GACCTCTACC AGTCGCACGA CGACGATCCC TCCACGCCGC TCGAGGACAC GCTGGGCACC
TATGCCGACC TGATCCGCGA AGGCAAGGTG CGCGCCATCG GCGCATCCAA CCACACGGCC
GCCCGCCTGT CGGAAGCGCT CGCCACCAGC GCGCGGCTGG GCCTGCCGCG CTATGAATCG
CTGCAGCCGC TCTACAACCT GTACGACCGC GCGGTGTTCG AAGATGAATT GCAGCCGCTG
TGCCTGGAGC AGCAGGTGGG CGTCATCAAT TTCTACGCCC TGGCCGCCGG CTTCCTCACA
GGCAAGTACC GCAGCGAAGC CGACGCGTCC AAAAGCGCGC GCGGCGCCAA GACGGTGGAG
AAATACCTCA ATCCGCGCGG CCTGCGCATC CTGGCCGAGC TCGACGAGGT GGCCGAGCGT
TACGAGGCCA CGCCCGGCCA GGTCGCCATC GCATGGCAGA TGGCCCAGCC CGCCATCACC
GCGCCGATCG CCAGCGCGAC CTCGCTGGAG CAGCTGCAGG ACCTGGTGCG CGCCGCGCAC
CTGCAGCTCG ACGCCGACGC ACTGGAAGCG CTGAGCCAGG CCAGCGAGGA ATCCCCCGAC
GAGGCTCGGC CCCTTTAA
 
Protein sequence
MQSRPLGRSG LQVSPLCFGG NVFGWTVDEP TTFSLIDAWL DAGFNFIDTA DVYSRWNPGH 
MGGESEALIG QWLKRTGKRD RIVLATKVGK DMGDGRVGLK PDYIRRAVED SLRRLHTDYI
DLYQSHDDDP STPLEDTLGT YADLIREGKV RAIGASNHTA ARLSEALATS ARLGLPRYES
LQPLYNLYDR AVFEDELQPL CLEQQVGVIN FYALAAGFLT GKYRSEADAS KSARGAKTVE
KYLNPRGLRI LAELDEVAER YEATPGQVAI AWQMAQPAIT APIASATSLE QLQDLVRAAH
LQLDADALEA LSQASEESPD EARPL