| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2998 |
|---|
| Symbol | |
|---|
| ID | 4667367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3305979 |
|---|
| End bp | 3306788 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639824200 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_971339 |
|---|
| Protein GI | 120611661 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.186878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTGA CCGTCAACGG CCACGCGGCC TATTGCTATA CGGGCAGCAA GCCCTTCGAC
CCGGCACTGC CCACGGTGGT GATGGTGCAT GGCGTGCTCA ACGACCACAG CGTGTGGGGC
TTCCAGAGCC GGCATCTCGC GCACCACGGC TGGAATGTGC TGGCGGTGGA CCTTCCGGGC
CACGGCCGCA GCGGTGGGGA GGCGCCGCAG AGCGTGGAAG AGGCAGCGGA TTTCATCGTG
GGCCTGCTGC GCGCGCTGGG CGTGGAGCGG GCGGCGCTCG TGGGCCACAG CTGGGGGTCG
CTGATCGCGC TGGAGGCGGC CGCGCGGCTC GGCACCGCCG CGACGCACCT GGCGCTGGTG
GGCACGGCCT ACCCGATGAA GGTGTCGCCC GCGCTCATCG AAACCTCGCT GAACGAACCC
GAGAAGGCGC TGCGGATGGT GAACGTGTTC TCCCGCGGCA GCCTCGCGTC GCCCTCGGGC
GCGGGCTTCT GGACCTTCGG CGCGGGCATG GCGCTCGGCC GCCGCGTGCT GCGCAGCAAT
CCGCACGTGA ACGTGTTCCA CCGCGGATTC GTGGCCTGCG ACCGCTATGC GGGGGCAGAA
GCTGCCATCG CCGCCCTCGC CTGCCCGGTG CTGTTCGCAC TGGGCGCGCA GGACCAGATG
ACGCAGCCCC GCGCGGCCCA GGGCCTGATC GCGGCGGCGC GCGCGGCGGG GCGGGAGGTG
CGGGTGGAGA TGCTGCCCGT GGGCCATTTC CAGATGACGG AGGCACCGGA GGAGACGCTG
CGCGCGCTGC GCACCTTCCT GGGCGCCTGA
|
|---|
| Protein sequence | MQVTVNGHAA YCYTGSKPFD PALPTVVMVH GVLNDHSVWG FQSRHLAHHG WNVLAVDLPG
HGRSGGEAPQ SVEEAADFIV GLLRALGVER AALVGHSWGS LIALEAAARL GTAATHLALV
GTAYPMKVSP ALIETSLNEP EKALRMVNVF SRGSLASPSG AGFWTFGAGM ALGRRVLRSN
PHVNVFHRGF VACDRYAGAE AAIAALACPV LFALGAQDQM TQPRAAQGLI AAARAAGREV
RVEMLPVGHF QMTEAPEETL RALRTFLGA
|
|---|
| |