Gene Aave_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2969 
Symbol 
ID4669328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3259539 
End bp3260504 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID639824169 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_971310 
Protein GI120611632 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.381415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.757286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAA CGGTATGGAG TGGTGTGTCG CGGCTCGCCG CCGCGGCAGG CATGGTCGGG 
CTGGCAATGG CCGCCCAGGC CCAGGAGACG AAGATCGCGC TGGGCATGTC CGGCTGGACC
GGCTTCGCGC CGCTGACCCT GGCCGACAAG GCCGGCATCT TCAGGAAGAA TGGCCTGGAC
GTGGAACTGA AGATGATTCC GCAGAAGGAC CGCCACCTCG CCCTGGCATC CAAGGCCATC
CAGTGCGCCG CCACCACGGT GGAGACGCAC GTCGCCTGGA ACACCAACGG CGTGCCCATC
GTTCAGATCT TCCAGATGGA CAAGTCCTAC GGCGCCGACG GTATCGCGGT GCGCAACGAC
GTGAAGAGCT TCGCCGACCT CAAGGGCAAG ACCGTCGCCG TGAGCGCGCC AGGCACCGCG
CCGTACTTCG GCCTGGCCTG GATGCTGTCC AAGAACGGCA TGACGCTGAA AGACGTGAAG
ACCGTGTCGC TGGAGCCGCA GCCGGCCGCG CAGGCCTTCG TGTCGGGCCA GAACGACGCC
GCGATGACCT ACGAGCCGTA CCTGTCCACC ATCCGCGCCA ACCCGCAGGC GGGCAGGATC
CTCGCCACCA CCATCGACTA CCCCATGGTG ATGGACACCG TGGGCTGCGC GCCCGAGTGG
CTCAAGGCGA ACCCCAAGGC CGCGCAGGCG CTCACGCAGT CGTATTTCGA TGCGCTGGAG
ATGATCAAGG CCGACCCGGC CAGGTCCAAC GAGATCATGG GCGCCGCCGT CAAGCAGACG
GGCGAGGCCT TCGCCAAGTC GTCGGCCTAC CTGCGCTGGC AGGACAAGGC CGCCAACCAG
AAGTTCTTCG CGGGCGAGCT GCAGCAGTTC ATGAAGGATG CCGGCGCGAT CCTGCTGGAG
GCGGGCGTCG TGCGCAAGCA GCCGGACAAC TTTGCCGCCA TGTTCGACGA CAGCTTCATC
AAGTGA
 
Protein sequence
MGRTVWSGVS RLAAAAGMVG LAMAAQAQET KIALGMSGWT GFAPLTLADK AGIFRKNGLD 
VELKMIPQKD RHLALASKAI QCAATTVETH VAWNTNGVPI VQIFQMDKSY GADGIAVRND
VKSFADLKGK TVAVSAPGTA PYFGLAWMLS KNGMTLKDVK TVSLEPQPAA QAFVSGQNDA
AMTYEPYLST IRANPQAGRI LATTIDYPMV MDTVGCAPEW LKANPKAAQA LTQSYFDALE
MIKADPARSN EIMGAAVKQT GEAFAKSSAY LRWQDKAANQ KFFAGELQQF MKDAGAILLE
AGVVRKQPDN FAAMFDDSFI K