Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2969 |
Symbol | |
ID | 4669328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3259539 |
End bp | 3260504 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639824169 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_971310 |
Protein GI | 120611632 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.381415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.757286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAGAA CGGTATGGAG TGGTGTGTCG CGGCTCGCCG CCGCGGCAGG CATGGTCGGG CTGGCAATGG CCGCCCAGGC CCAGGAGACG AAGATCGCGC TGGGCATGTC CGGCTGGACC GGCTTCGCGC CGCTGACCCT GGCCGACAAG GCCGGCATCT TCAGGAAGAA TGGCCTGGAC GTGGAACTGA AGATGATTCC GCAGAAGGAC CGCCACCTCG CCCTGGCATC CAAGGCCATC CAGTGCGCCG CCACCACGGT GGAGACGCAC GTCGCCTGGA ACACCAACGG CGTGCCCATC GTTCAGATCT TCCAGATGGA CAAGTCCTAC GGCGCCGACG GTATCGCGGT GCGCAACGAC GTGAAGAGCT TCGCCGACCT CAAGGGCAAG ACCGTCGCCG TGAGCGCGCC AGGCACCGCG CCGTACTTCG GCCTGGCCTG GATGCTGTCC AAGAACGGCA TGACGCTGAA AGACGTGAAG ACCGTGTCGC TGGAGCCGCA GCCGGCCGCG CAGGCCTTCG TGTCGGGCCA GAACGACGCC GCGATGACCT ACGAGCCGTA CCTGTCCACC ATCCGCGCCA ACCCGCAGGC GGGCAGGATC CTCGCCACCA CCATCGACTA CCCCATGGTG ATGGACACCG TGGGCTGCGC GCCCGAGTGG CTCAAGGCGA ACCCCAAGGC CGCGCAGGCG CTCACGCAGT CGTATTTCGA TGCGCTGGAG ATGATCAAGG CCGACCCGGC CAGGTCCAAC GAGATCATGG GCGCCGCCGT CAAGCAGACG GGCGAGGCCT TCGCCAAGTC GTCGGCCTAC CTGCGCTGGC AGGACAAGGC CGCCAACCAG AAGTTCTTCG CGGGCGAGCT GCAGCAGTTC ATGAAGGATG CCGGCGCGAT CCTGCTGGAG GCGGGCGTCG TGCGCAAGCA GCCGGACAAC TTTGCCGCCA TGTTCGACGA CAGCTTCATC AAGTGA
|
Protein sequence | MGRTVWSGVS RLAAAAGMVG LAMAAQAQET KIALGMSGWT GFAPLTLADK AGIFRKNGLD VELKMIPQKD RHLALASKAI QCAATTVETH VAWNTNGVPI VQIFQMDKSY GADGIAVRND VKSFADLKGK TVAVSAPGTA PYFGLAWMLS KNGMTLKDVK TVSLEPQPAA QAFVSGQNDA AMTYEPYLST IRANPQAGRI LATTIDYPMV MDTVGCAPEW LKANPKAAQA LTQSYFDALE MIKADPARSN EIMGAAVKQT GEAFAKSSAY LRWQDKAANQ KFFAGELQQF MKDAGAILLE AGVVRKQPDN FAAMFDDSFI K
|
| |