Gene Aave_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2965 
Symbol 
ID4669246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3255187 
End bp3256725 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content72% 
IMG OID639824165 
Producthistidine ammonia-lyase 
Protein accessionYP_971306 
Protein GI120611628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.048059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.285122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TGCCCACCCT CGTACTGCAC CCCGGCCGGG TCACCCTGGC CGAACTGCGC 
GCCATCGCCG CCGGCGGCCA GCGGCTGGCA CTGGATGCCT CCGCCCTGGC CGGCATGCGG
GCTTCCCAGG CGACGGTGGA CCGCATCGCC CTGGAAGAAC AGGTGGTCTA TGGCATCAAC
ACCGGCTTCG GCAAGCTCGC CAGCACGAAG ATCGCGCACG ACCGGCTGGC CGAGCTGCAG
CGCAACCTGG TGCTCTCGCA CAGCGTGGGC ACGGGCGATC CGCTGCCGGA CGGCGTGGTC
CGCATGGTGT TGGCCACCAA AGCCGTGAGC CTGGCGCGCG GCCATTCGGG CGTGCGCCCG
GCCCTGGTCG ATGCGCTGCT GGCGCTGGCC AATGCCGACG TGCTGCCGGT GATTCCCGCC
AAGGGCTCGG TGGGGGCTTC GGGCGATCTC GCGCCCCTGG CGCACCTGGC CTGCGTGCTG
ATCGGCGAGG GCGCGGCCCA GGTCGGTGGC CGGATCGTCA CCGGGCGCGA GGCCATGGCC
GCCGTGGGGC TGGAGCCGTT CGTGCTGGGT CCCAAGGAAG GCCTGGCCCT GCTCAATGGC
ACGCAGGTGT CCACCGCGCT GGCGCTGGCG GGACTGTTCG CGGCCGAGAA CGTGTTCGCC
GCCGGCCTGG TGTCGGGCTG CCTCACGCTG GAGGCCATCA AGGGCTCGGT CAAGCCCTTC
GACGCGCGCA TCCACGAAGC GCGCGGGCAG GCCGGCCAGA TCGCCGTCGC CGCCGCCGTG
CGCGCGCTGC TGGAAGGCAG CGCCATCGAT CCCTCCCACC CGGACTGCGG CCGCGTGCAG
GACCCGTATT CCATCCGCTG CGTGCCCCAG GTCATGGGCG CCTGCCTGGA CAACCTTTCG
CATGCCGCCC GCGTGTTGCA GATCGAGGCC AATGCCGCGT CGGACAACCC GCTGGTGTTC
ACGGACACGG GCGAGGTGAT CTCCGGCGGC AACTTCCATG CCGAACCGGT CGCCTTCGCG
GCGGACATCA TCGCTCTGGC GCTGTCGGAG ATCGGCGCCA TCTCGGAGCG CCGCCTCGCG
CTGCTGCTCG ACACGGGCCT GTCGGGCCTG CCGGCCTTCC TGATCCGGGA CAGCGGCGTC
AACTCCGGCT TCATGATCGC CCAGGTCACG GCCGCGGCCC TGGCCGCCGA GAACCAGTGC
CTGGCCCACC CCAGCAGCGT GACCAGCCTG CCCACCTCGG CCAACCAGGA AGACCACGTC
TCCATGGCCA CCTACGCCGC GCGGCGCCTG CTGGACATGG CGCGCAACAC GGCGGTGATC
GTGGGCATCG AGGCCATGGC CGCCGCGCAG GGCATGGAGT TCGACCGCAG CCTGAAATCA
TCCCCGCTGA TCGAGGCGCA GTTCGCCGCC ATCCGCGGGC GCGTGGCCTT CCTTGAGCAG
GACCGCTACC TCGCGCCCGA CATCGAGGCC ATGCGCCTGT GGGCCAGCAC CTCGGCGTGG
CCCGCGCCGC TCGCGGCCTG CCTGCCCAGC TTCCAGTAA
 
Protein sequence
MSAMPTLVLH PGRVTLAELR AIAAGGQRLA LDASALAGMR ASQATVDRIA LEEQVVYGIN 
TGFGKLASTK IAHDRLAELQ RNLVLSHSVG TGDPLPDGVV RMVLATKAVS LARGHSGVRP
ALVDALLALA NADVLPVIPA KGSVGASGDL APLAHLACVL IGEGAAQVGG RIVTGREAMA
AVGLEPFVLG PKEGLALLNG TQVSTALALA GLFAAENVFA AGLVSGCLTL EAIKGSVKPF
DARIHEARGQ AGQIAVAAAV RALLEGSAID PSHPDCGRVQ DPYSIRCVPQ VMGACLDNLS
HAARVLQIEA NAASDNPLVF TDTGEVISGG NFHAEPVAFA ADIIALALSE IGAISERRLA
LLLDTGLSGL PAFLIRDSGV NSGFMIAQVT AAALAAENQC LAHPSSVTSL PTSANQEDHV
SMATYAARRL LDMARNTAVI VGIEAMAAAQ GMEFDRSLKS SPLIEAQFAA IRGRVAFLEQ
DRYLAPDIEA MRLWASTSAW PAPLAACLPS FQ