Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2965 |
Symbol | |
ID | 4669246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3255187 |
End bp | 3256725 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639824165 |
Product | histidine ammonia-lyase |
Protein accession | YP_971306 |
Protein GI | 120611628 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.048059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.285122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA TGCCCACCCT CGTACTGCAC CCCGGCCGGG TCACCCTGGC CGAACTGCGC GCCATCGCCG CCGGCGGCCA GCGGCTGGCA CTGGATGCCT CCGCCCTGGC CGGCATGCGG GCTTCCCAGG CGACGGTGGA CCGCATCGCC CTGGAAGAAC AGGTGGTCTA TGGCATCAAC ACCGGCTTCG GCAAGCTCGC CAGCACGAAG ATCGCGCACG ACCGGCTGGC CGAGCTGCAG CGCAACCTGG TGCTCTCGCA CAGCGTGGGC ACGGGCGATC CGCTGCCGGA CGGCGTGGTC CGCATGGTGT TGGCCACCAA AGCCGTGAGC CTGGCGCGCG GCCATTCGGG CGTGCGCCCG GCCCTGGTCG ATGCGCTGCT GGCGCTGGCC AATGCCGACG TGCTGCCGGT GATTCCCGCC AAGGGCTCGG TGGGGGCTTC GGGCGATCTC GCGCCCCTGG CGCACCTGGC CTGCGTGCTG ATCGGCGAGG GCGCGGCCCA GGTCGGTGGC CGGATCGTCA CCGGGCGCGA GGCCATGGCC GCCGTGGGGC TGGAGCCGTT CGTGCTGGGT CCCAAGGAAG GCCTGGCCCT GCTCAATGGC ACGCAGGTGT CCACCGCGCT GGCGCTGGCG GGACTGTTCG CGGCCGAGAA CGTGTTCGCC GCCGGCCTGG TGTCGGGCTG CCTCACGCTG GAGGCCATCA AGGGCTCGGT CAAGCCCTTC GACGCGCGCA TCCACGAAGC GCGCGGGCAG GCCGGCCAGA TCGCCGTCGC CGCCGCCGTG CGCGCGCTGC TGGAAGGCAG CGCCATCGAT CCCTCCCACC CGGACTGCGG CCGCGTGCAG GACCCGTATT CCATCCGCTG CGTGCCCCAG GTCATGGGCG CCTGCCTGGA CAACCTTTCG CATGCCGCCC GCGTGTTGCA GATCGAGGCC AATGCCGCGT CGGACAACCC GCTGGTGTTC ACGGACACGG GCGAGGTGAT CTCCGGCGGC AACTTCCATG CCGAACCGGT CGCCTTCGCG GCGGACATCA TCGCTCTGGC GCTGTCGGAG ATCGGCGCCA TCTCGGAGCG CCGCCTCGCG CTGCTGCTCG ACACGGGCCT GTCGGGCCTG CCGGCCTTCC TGATCCGGGA CAGCGGCGTC AACTCCGGCT TCATGATCGC CCAGGTCACG GCCGCGGCCC TGGCCGCCGA GAACCAGTGC CTGGCCCACC CCAGCAGCGT GACCAGCCTG CCCACCTCGG CCAACCAGGA AGACCACGTC TCCATGGCCA CCTACGCCGC GCGGCGCCTG CTGGACATGG CGCGCAACAC GGCGGTGATC GTGGGCATCG AGGCCATGGC CGCCGCGCAG GGCATGGAGT TCGACCGCAG CCTGAAATCA TCCCCGCTGA TCGAGGCGCA GTTCGCCGCC ATCCGCGGGC GCGTGGCCTT CCTTGAGCAG GACCGCTACC TCGCGCCCGA CATCGAGGCC ATGCGCCTGT GGGCCAGCAC CTCGGCGTGG CCCGCGCCGC TCGCGGCCTG CCTGCCCAGC TTCCAGTAA
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Protein sequence | MSAMPTLVLH PGRVTLAELR AIAAGGQRLA LDASALAGMR ASQATVDRIA LEEQVVYGIN TGFGKLASTK IAHDRLAELQ RNLVLSHSVG TGDPLPDGVV RMVLATKAVS LARGHSGVRP ALVDALLALA NADVLPVIPA KGSVGASGDL APLAHLACVL IGEGAAQVGG RIVTGREAMA AVGLEPFVLG PKEGLALLNG TQVSTALALA GLFAAENVFA AGLVSGCLTL EAIKGSVKPF DARIHEARGQ AGQIAVAAAV RALLEGSAID PSHPDCGRVQ DPYSIRCVPQ VMGACLDNLS HAARVLQIEA NAASDNPLVF TDTGEVISGG NFHAEPVAFA ADIIALALSE IGAISERRLA LLLDTGLSGL PAFLIRDSGV NSGFMIAQVT AAALAAENQC LAHPSSVTSL PTSANQEDHV SMATYAARRL LDMARNTAVI VGIEAMAAAQ GMEFDRSLKS SPLIEAQFAA IRGRVAFLEQ DRYLAPDIEA MRLWASTSAW PAPLAACLPS FQ
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