Gene Aave_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2958 
Symbol 
ID4668616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3247491 
End bp3248402 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID639824158 
Producthypothetical protein 
Protein accessionYP_971299 
Protein GI120611621 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.395284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.675669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CGCATGATTC ACCGCTGATA CCGGCCCTCG CCATCCTGGG ATCCGTGACT 
TTCCTCGGGA TCGGCACGTC CTGGGCCAAG CATTCCCTGT TCCCGCTGGT CGGTGCCCAG
GGCACCACGG CCCTGCGCGT GGGCTTCTCG GCCCTGTTGC TGCTGCTCCT GTGGCGTCCC
TGGCGGCGGC CGCTCGCACG GGCCGATGCG GCACGCATCG CCGCCTACGG CGCCGCCCTG
GGCGCGATGA ACCTCTGCTT CTACCTGTCG CTGCAGACCA TTCCCTTCGG CGTGGCCGTG
GCGATCGAGT TCTCCGGCCC GCTGGCGGTG GCGCTGCTGT CGTCCCGCCG TCCACTGGAT
TTCATCTGGG TGGTCCTGGC GGTCGCGGGG CTGGGCCTGC TGCTGCCCTG GCAGCAGAAT
GCCGGAATGC TCGACCTCCG GGGCGTGATC TTCGCGCTGG CGGCCGCCGT GTTCTGGGCG
GGCTACATCC TGTTCGGCAA GCGCCTGGGA CACCTGCACG CCGGGCATTC CGTGCCCCTC
GGGCTGGCCG CGGCATCGCT GGTCGTGGTG CCCGTGGGCA TCGGGCATGC CGGGGCCGGC
CTGCTGGCAC CGGGCGTGCT GCTCACCGGC ATCGGCGTGG CCGCATTGTC CAGCGCCGTG
CCGATCATGC TGGAAATGGT GGCGCTCAAG CGCCTGCCCC AGCAGGCCTT CGGCATCATG
ATCAGCATGG AGCCCGCCGT CGCCGCACTG CTGGCACTGG TACTGCTCGG CGAGTACCTG
AGTCCGGCCC AGTGGCTGGC CATCGGCATG ATCGTCTCAG CCTCCATGGG ATGCGCCTTC
ACCGCACCGC GCCGGTCCCC GCAGCCGCCG CCCGTGCCGC CCGCGGATGC GGGCGCGGCC
TCGCGCGGCT GA
 
Protein sequence
MSTSHDSPLI PALAILGSVT FLGIGTSWAK HSLFPLVGAQ GTTALRVGFS ALLLLLLWRP 
WRRPLARADA ARIAAYGAAL GAMNLCFYLS LQTIPFGVAV AIEFSGPLAV ALLSSRRPLD
FIWVVLAVAG LGLLLPWQQN AGMLDLRGVI FALAAAVFWA GYILFGKRLG HLHAGHSVPL
GLAAASLVVV PVGIGHAGAG LLAPGVLLTG IGVAALSSAV PIMLEMVALK RLPQQAFGIM
ISMEPAVAAL LALVLLGEYL SPAQWLAIGM IVSASMGCAF TAPRRSPQPP PVPPADAGAA
SRG