Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2957 |
Symbol | |
ID | 4667799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3245355 |
End bp | 3247406 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639824157 |
Product | beta strand repeat-containing protein |
Protein accession | YP_971298 |
Protein GI | 120611620 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.280909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAC TCTACAGTGC GCCGCTGCGG GCTCCCGGAG GAGCCCGTTT TGTCTGGGGC CGCCAAGGCT CCGTTGGCCC GTTTTCCACC CATACCATGA CGATCTCCCT CTCCCGCCGT CCCCTGATCC TGGCGCTTGC CGCTGCGTTC GCGCTCTCTG CCTGCGGTGG CGGCGGCTCC GGCACCAGTG CCGTTCCCGC CCCGCCGCAG GGCCTGGGCA TGGCGGACAC CGCCCCCGTC CCCAACGAAG CGGCCGTGCC GCCTTTCGTG GACAACGCGG CCACCAACCA GCGCGGCGAT GCGCGCTACG CCACGCTCGA AACCAATGCC GGCGTGCGGG TGCTGTCGGG CTTCCTCTCG ATCTGGAAGC CTTCCACGCT GCGGGTGGAC GCGGGTGTGA GCGCCGCCGC GAACGGTGCC TTCCCGGCCG TCGCGCCCTC CATCTGGAGC GGCATTCCCG GCGATGCGAC CGACGGGACG GTGCTCAATG CCCAGGTGCA TGCGCGCAAC ATCCAGTACG TCGTGGATGC CACGGGCCGC CGCACGCCCG CCCAGGAACT CCTGGCCTAC CTGGATGACC GCCGCGGCAA GGCCTACAGC GTGAGCGACG GCATGGGGCC GCTGACGGCC GCGTGGCGCG CCGCCGCGCA GCAGACGACG ACCATCACCG CGATCCCGGC CGATGCGACC ACCGTGGTGT ACAACGACGG CGGCAACAAC ACGGGCGTGG GCGGCAGCGC CAACGCCGCT TTCGGCACGG CGGTGGATTT CGTCGGCGGC ATCGGCGAGA ACGGCTCCAC GGAGCCCGCC AAGCGCTTCT ACAAGTACGC GCGGCCCTGG CGCTGGAGCA GCGCCGTGCA GGTGGTGCCC GCCCTGCTCC CGGCGCGCAG CACCACGCCG ACCACGGACG GCGGCTTCAC CAGCGGCCAC ACCGCGGAGG CCGTGCGCAG TTCGATCGCC ATGGCCTATC TGGTGCCGGA GCGCTTCCAG GAGATGGTCG CGCGCGGCCT GGAGCTGGGC GAGAGCCGCA TCCTGGCCGG CATGCACTCT CCCCTGGATG TGATCAGCGG CCGCATGCAC GGCCAGGCCG TGGCCACCGC GAGCATCGCG ACCGGCGCGA ACGCGGCCCG CAAGGCGGCG GCCTTCCAGC AGGCGCGCAG CGCGCTGATG GCCGCCGCGG GTGCCAGGAC GCCTGCCGAA CTGTGGCAGT TCGCGCATTC GCAGCCATCC GCCACGGACC GTTTCGCGGA CTATGCGACG AACCGCTCCG AGTACCTGCG GCGCATGACC TTCGGCTTCC CGCAGATCGG CGACGCTTCG CGCCCGGCCG TGGTGCCCAA GGGGGCGGAA GTGCTGCTGG AGACCCGCCT GCCTTACCTG GACGCCATGC AGCGCCGGGT GGTGCTCAAG ACCACGGCCG TGCCGTCGGG CTACCCCGTC ATGGACGACG CGGAAGGCTG GGGCCGCCTG AACCTGTTCG CCGCCGCCGA CGGCTATGGC CGCTTCGACG GCGATGTGGC GGTGACCATG GACGCTGCCC AGGGCGGCTT CAGCGCGCTC GACACGTGGC GCAATGACAT CGCCGGGGCC GGCAAGCTGA CGAAGCTCGG CAGCGGCACG CTGGTGCTCG CCGGCAACAA CAGCTTCACG GGCGGCATCG AGCTGGCGGC AGGCACCCTG CAGGCAGGCA GCGGTTCGGC GCTGGGCAAT GGCGCGGTGT ATGTGGGCGG CGGCACGCTG CGCACCACGG TTTCCGGCGA AGTGGCGGTG AACGGCTCCT ACACCCAGCG TCCGGGCGGC ACGCTGTCGC TGCAGATGGC TTCCGCCAGC GGCACGGCGG GCACGCTGAC CGTGAACGGC CCGGCGGCAC TGGCCGGCAC GCTCGAGGTG AACTTCGCCC AGGGCGTGCG CCCCGCCGTG GGTTCGACGA TCACCGTGCT GCGCCATGGC GGCCTCAGCG GGGCCTTCGA TGCAGTGTCC GTGCCGGGCT ACCGCGTGAC GCCGGTGTAT CTGAACAACG CCGTGCAGTT GCGCATCGAC GCCGCAGCCT GA
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Protein sequence | MAALYSAPLR APGGARFVWG RQGSVGPFST HTMTISLSRR PLILALAAAF ALSACGGGGS GTSAVPAPPQ GLGMADTAPV PNEAAVPPFV DNAATNQRGD ARYATLETNA GVRVLSGFLS IWKPSTLRVD AGVSAAANGA FPAVAPSIWS GIPGDATDGT VLNAQVHARN IQYVVDATGR RTPAQELLAY LDDRRGKAYS VSDGMGPLTA AWRAAAQQTT TITAIPADAT TVVYNDGGNN TGVGGSANAA FGTAVDFVGG IGENGSTEPA KRFYKYARPW RWSSAVQVVP ALLPARSTTP TTDGGFTSGH TAEAVRSSIA MAYLVPERFQ EMVARGLELG ESRILAGMHS PLDVISGRMH GQAVATASIA TGANAARKAA AFQQARSALM AAAGARTPAE LWQFAHSQPS ATDRFADYAT NRSEYLRRMT FGFPQIGDAS RPAVVPKGAE VLLETRLPYL DAMQRRVVLK TTAVPSGYPV MDDAEGWGRL NLFAAADGYG RFDGDVAVTM DAAQGGFSAL DTWRNDIAGA GKLTKLGSGT LVLAGNNSFT GGIELAAGTL QAGSGSALGN GAVYVGGGTL RTTVSGEVAV NGSYTQRPGG TLSLQMASAS GTAGTLTVNG PAALAGTLEV NFAQGVRPAV GSTITVLRHG GLSGAFDAVS VPGYRVTPVY LNNAVQLRID AAA
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