Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2856 |
Symbol | rplT |
ID | 4669797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3148102 |
End bp | 3148464 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639824056 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_971198 |
Protein GI | 120611520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.366682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGCG TCAAACGTGG TGTAACGGCA CGCGCCCGTC ACAAGAAAGT TCTGGCCCTC TCCAAGGGTT TCCGCGGCCG CCGCGGCAAC GTCTTCCGCA TCGCCAAGCA GGCGGTGATG AAGGCAGGCC AATACGCCTA CCGTGACCGC CGTACCAAGA AGCGCGTGTT CCGCCAACTG TGGATCGCCC GTATCAATGC CGCTTCCCGC GAACTGGGCC TGACCTACAG CCAGTTCACG AACGGCCTGA AGAAGGCTGC CATCGAGATC GACCGCAAGA TGCTGGCCGA CCTCGCGGTG CACGACAAGG CTGCCTTCGG CAGCATCGTG GAACAAGTCA AGGCCAAGCT GGCCGCCGCT TGA
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Protein sequence | MPRVKRGVTA RARHKKVLAL SKGFRGRRGN VFRIAKQAVM KAGQYAYRDR RTKKRVFRQL WIARINAASR ELGLTYSQFT NGLKKAAIEI DRKMLADLAV HDKAAFGSIV EQVKAKLAAA
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