Gene Aave_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2829 
Symbol 
ID4666560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3108224 
End bp3109417 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content65% 
IMG OID639824028 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_971171 
Protein GI120611493 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTCAC GAAAAATCAA TGCAATTGTG AGAAATTCGC TGCAGTTCGG CGTTTTTCTA 
TCGTTGATGG CGACAGAATG CGCGTGCGTT GCAGCAGCGG AAACCGGGCC TGCGCCCGTC
CGTCCCGTGG AATCCTCCGT GTCTGTCACA GTTGATGACA TCACGGATGG GTTGTCCAGC
CCGTGGGCAC TGGCATTTCT TCCTGATGGT CGTTTCCTTG TGACGGAACG GACCGGCCGG
CTACGGGTGA TCGATGCGAA GGGGGTGAAA AGCGCTCCGC TGTCGGGTCT TCCGCACTTG
GCCGTGGGTG GGCAGGGTGG ATTGCTCGAT GTCGCGACGG ACGCGCAATT CGACCGCAAC
CGCCGCATCT TCTTCTGCTT CTCCGAGCCG GACGGGCGGG ACGGCGACGT GAATGGCACG
GCCCTGGCCA GCGCCGTGCT GCCGCCTGGC GAACAGGCGC TGCAGGATGT GCGCGTCATT
TTCCGGCAGC AGCCCAAGGT GGCGAGCCGC CTGCATTTCG GATGTCGCAT CGCCCAGGCG
AAAGACGGGT CGATTTTCCT CACGCTGGGT GAGCGCTTCG AACGCAAGGA AGATGCGCAG
AAGCTGGACA ACCACCTGGG CAAGGTCGTG CATGTCATGC CCGACGGCGC GCCCGCGTCC
GGCAATCCGT TCGTCGGGCG GTCCGGGGGC CTGCCCGAGA TCTGGAGCTG GGGACACCGC
AATTCCCAGG GCGTGGTGAT CGGGCCCGAT GGCAGGCTGT GGATGCACGA GCACGGCCCC
CAGGGCGGCG ATGAAATCAA CGTGCCGCAG GCCGGGCGCA ACCATGGCTG GCCCGTGGTC
ACCTTCGGCG AGAACTATGG CGGCGGAAAG ATCGGTGAAG GGCTGACGCA GAAGGCCGGC
ATGGAGCCGC CGCTGCATTA CTGGGTGCCG TCGATCGCCC CGTCGGGCAT GGCGTTCCTG
ACGAGCGATC GCTATGGGCC TGCATGGAAA GGTAGCCTGT TCATCGGTTC GCTGAAGTTC
GCGCGCCTGC ATCGCCTGGA GCTGAAAGAC GGGCGGGTCG TGCGGGACGA GTTCCTGCTC
GCTCGCCTGG GCCAGCGGAT TCGGGACGTG CGCCAGGGGC CCGACGGCTG GCTCTATGTG
CTGACGGACG GTCCGCAGGG CCGGCTGCTG CGGCTGCGTC CGGCCGGTTC CTGA
 
Protein sequence
MTSRKINAIV RNSLQFGVFL SLMATECACV AAAETGPAPV RPVESSVSVT VDDITDGLSS 
PWALAFLPDG RFLVTERTGR LRVIDAKGVK SAPLSGLPHL AVGGQGGLLD VATDAQFDRN
RRIFFCFSEP DGRDGDVNGT ALASAVLPPG EQALQDVRVI FRQQPKVASR LHFGCRIAQA
KDGSIFLTLG ERFERKEDAQ KLDNHLGKVV HVMPDGAPAS GNPFVGRSGG LPEIWSWGHR
NSQGVVIGPD GRLWMHEHGP QGGDEINVPQ AGRNHGWPVV TFGENYGGGK IGEGLTQKAG
MEPPLHYWVP SIAPSGMAFL TSDRYGPAWK GSLFIGSLKF ARLHRLELKD GRVVRDEFLL
ARLGQRIRDV RQGPDGWLYV LTDGPQGRLL RLRPAGS