| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2818 |
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| Symbol | |
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| ID | 4669153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3090417 |
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| End bp | 3091826 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639824017 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_971160 |
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| Protein GI | 120611482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.282777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.979363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG CCCGAACGGT CCGCCCAACG GTTCATCAGC CAGGAAAGAG ACGCTTGCCC
GCCATGACTT CCCGACGCAC GCATTTGCCC TCCCGCCGCG CCGCCGGCGC ACTGGCCTTC
GTCCTCGCGG CGGCGGCCGG GACCGCCTCC GCGCAGAGCC TTCCGGCGCT CTACGAACTT
GCGCAGGGCT ACGACGCCCC ACTGCAATCG GCGCTGGCCG ACGCGCAGGC CGCGGGCAGC
CGCGCGGAAC AGGCGCGTGC CGGCCTGCTT CCGAGCGCGG GGCTCTCGGC GGGCACCTCC
TATACACGCA CCGACGTGAA CCGCCCGCCG GTGGACCTCG GCGCTCCGCA GCAGACGGCG
GGCATCACGG CCTCGCAGCC GCTGTACCGC CCCGCCAACC GCATCGCGTT CGAGCAGGGG
CAGCGCGGTG CCGAGATCGC CCAGGCCCGG CTCGAAGCCG CGCGCCAGGA TCTGGTCGTG
CGGCTGGCGC AGGCCTATTT CGACGTGCTG GCGGCCCGGG ACAGCCTCAC CTTCCTGCGG
GCCCAGAAAG CCGCGGTGTC GGAGCAGCGG GCCTCGGCGC AGCGCAACTT CGAGGTGGGC
AACGCCACCA TTACCGACAC GCGCGAGGCG CAGGCCCGCT TCGATCTCGT CGAAGCCCAG
GAAATCGCGG CGGACAACGA CCTGCGCGTG AAACAGCTCG CGCTGGAGCA GTTGGTGGGC
TGGCCGGGCG TATCTCCCCT GCCCCTCGCA CAGCCCGTGC AACTGCCCGC CGTGACGCCG
GCCGACGCGC AAGCATGGGT GCGGACGGCG GACGAGTTGC AGCCACAACT GCGCCAGGCC
GCCATCGCGC TGGACGTGGC GCGCCTGGAA ACACGCAAGG CCGAAACCGG CCACCTGCCC
ACGGTGGACT TGCAGGCGGG CTACAACGTG GTGCGCAACC CCAACGGCAC CACCACGCTC
CCGCACGTCC ACTCCACCGC CCGTGCCGCC ACGGTCGGCG TGCAGATGAC GCTGCCGCTG
TTCGCGGGCT TCGCGGTGCA GAACCGCATC CGCGAAACCC TCTCGCTGGA GGAAAAGGCG
CGCGCGGATC TGGAAAACGC CCGCCGCACG GTGGCGCAGG CCGTGCGCAG CGCCTTCTTC
GGCGTGCAGT CCGGCCAGGG CCAGGTCCGT GCGCTGGAGG CCGCGGAGGC GTCGAGCCAG
AGCGCGCTGG AGGCCAACCG GCTGGGCTAC CAGGTGGGCG TGCGGGTGAA CATCGATGTG
CTCAATGCGC AGAGCCAGCT CTACCAGACC AAGCGCGACC TGGCCCAGGC GCGCTACAAC
GTGCTGCTGG GCACGCTCAA GCTGCGCCAG GCCGCGGGCA CGCTGACCCC CGACGACCTG
CGAGCGGTGG ACGCGATCAC CGCGCATTGA
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| Protein sequence | MPAARTVRPT VHQPGKRRLP AMTSRRTHLP SRRAAGALAF VLAAAAGTAS AQSLPALYEL
AQGYDAPLQS ALADAQAAGS RAEQARAGLL PSAGLSAGTS YTRTDVNRPP VDLGAPQQTA
GITASQPLYR PANRIAFEQG QRGAEIAQAR LEAARQDLVV RLAQAYFDVL AARDSLTFLR
AQKAAVSEQR ASAQRNFEVG NATITDTREA QARFDLVEAQ EIAADNDLRV KQLALEQLVG
WPGVSPLPLA QPVQLPAVTP ADAQAWVRTA DELQPQLRQA AIALDVARLE TRKAETGHLP
TVDLQAGYNV VRNPNGTTTL PHVHSTARAA TVGVQMTLPL FAGFAVQNRI RETLSLEEKA
RADLENARRT VAQAVRSAFF GVQSGQGQVR ALEAAEASSQ SALEANRLGY QVGVRVNIDV
LNAQSQLYQT KRDLAQARYN VLLGTLKLRQ AAGTLTPDDL RAVDAITAH
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