Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2732 |
Symbol | |
ID | 4665384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2998775 |
End bp | 3001909 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823931 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_971074 |
Protein GI | 120611396 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.421518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ATGAGACGCC GAGCAGATCC GCCGGCGTGC CAGCCTATGC GGAACTGCGC TGCGCGAGCA GTTTCTCCTT CCTCATCGGG GCGAGTCATC CGCACGAGCT TGTCGAGCGC GCCGCGCAGC TGGGCTACAC AGCCCTCGCG CTGACCGACG AATGCAGCCT GGCTGGCATC GTCCGCGCGC ACGTTGCCGC GAAGCAATGC GGCCTGCAGC TGCTGGTGGG AGCACAGTTC AAGGTGGCGC CGGATGGCGG CATGCCGCCA TGCACGCTCA CCGTGCTCGC GTGCGACCTG GAGGGCTATG GCAACCTGTG CGCCTTCATC ACGCGCCTGC GCCGAGCCGC ACAGAAAGGC ACGTACGAGC TCGCTGCACG AGATCTCTCC GGTAAGGATC TCGCGGGTTG CGTCGTCATC TGCTCACCCG AACGCATGAG CGCTGCGATC CAGCTGCAGA CGCTCGCGGA ATGGCTGCTC AGGCACTTCA TGGGCCGGTG TTGGATTGGC GTGGAGATGC TGCGCCAGAT CGATGACGAA GCATGGCTAG CAAGGCTACG CGCCACGAGC GAGGCCTCGG CATTGCCGCT GGTGGCCACC GGCGACGTTC ATTTCCATGT GCGCTCCCGC AAGCCGCTCC AAGACACGAT GACCGCGGTG CGGCTTGGGC GCCCTCTGGC CGAATGCGGC CTGGATTTGC AGCCGAACGC GGAGCGACAT CTCCGGACCC GGCTGCGCCT GGCGCAGACC TATCCGGCCG AGTTGCTTGA AGAGACGCTA CGCGTCGCCG CGCGCTGCGA TTTCAGCCTG GACGAGCTCC GCTACAACTA CCCCGCCGAG GTGGTTCCGC CGGGCGAGAC GCCGGCATCG CATCTGCGCC GCCTGACCTA CGAAGGTGCC GCCCGGCGTT GGCCGGCCGG CATTCCGCCC AAGGTGCAGG AGATCGTTGA GCATGAGCTC TCGCTCATCG AGGACCTCCG CTACGAGCAC TACTTCCTGA CCGTTGCCGA CATCGTTGAT TTCGCCCGCA GCCGCGGCAT CCTCTGCCAG GGGCGCGGGT CGGCCGCGAA CTCGGCGGTG TGCTACTGCT TGCACGTCAC GGAAGTGGAT CCCGCACGCA TGTCCGTGCT CTTCGAGCGC TTCTTGTCGC GCGAGCGGAA CGAACCGCCC GACATCGACA TCGATTTCGA GAACGCCCGG CGCGAGGAAG TGATCCAGTA CCTCTACGGG AAGTACGGCC GCGAGCGCGC AGCCTTGACC GCCGTGGTCA CCAGCTACCG TCCGCGCTCG GCCCTGCGCG ACGTCGGCAA GGCCTTGGGC TTCGATGAGG GGACTGTCTC AGCGTTGGCC AAGGATCACC AATGGTGGGA AGAGGATTCG GTGCGCGACG AGCAGTTGCA GGCGCTCGGC CTCGATGCAG AAGATCTGCG CGTGCGCCAA CTGCTGGAGC TCACCGAGCA GCTGCTCGGC TTCCCTCGTC ACCTGAGCCA GCACCCTGGC GGCTTCGTGC TGACCCAGGA TCCTTTGTGC CGCATGGTGC CCATCGAGAA CGCCGCCATG GAGGACCGCA CGGTCATCCA GTGGGACAAG GACGACCTCG ACGCGGCCGG CCTGCTCAAG GTCGACGTGC TCGCGCTCGG CATGCTGACC GCGATCCGGA AAGCCCTGGT GATGGTCGGC CAGATCCGAG GCCTGGACGA TGCGCTGGAC CTGCAGGACA TCCCCGCGGA GGATCCCGCG ACCTACGAGA TGCTGTGCCG CGCCGACAGC ATCGGGGTGT TCCAGGTCGA GAGCCGTGCG CAGATGAGCA TGCTGCCGCG GTTGCGCCCG AGATGTTTCT ACGACCTGGT CGTCCAGGTG GCCATCGTCC GCCCGGGCCC GATCCAGGGC GGCATGGTGC ATCCATACCT GGACCGTCGG CAGGGCCTGG TGCCGGTGAC GTACCCCAGC GAGGCGTTGC GCGAGGTGCT GGGACGTACG CTTGGTGTTC CGGTCTTCCA GGAGCAGGTG ATGCAGTTGG CGATCGTGGC CGCGGGGTTT TCCGCCGGCG AGGCCGATGG CCTCCGGCGC GCAATGGCCG CCTGGAAAAG GAAAGGCGGG CTGGAGAAGT ACCACGCGAA GCTGGTGGAC GGTATGTTGG CGCGAGGGTA CGAACGGGAG TACGCAGAGA GGGTGTTCCT GCAGGTTTAC GGATTCAGCG AGTACGGCTT TCCTGAAAGC CATGCTGCCA GTTTTGCGCT ACTTGTCTAC GCGAGCAGTT GGATAAAGCG ACACCACCCG GCTGCATTTC TCGCCGCCCT CCTCAACTCG CAACCCATGG GCTTCTACTC GCCCTCGCAG CTGGTGCAGG ATGCGCGCCG GCACGGCGTG GGAGTGCGGG CACCGGATGT GCTGCACAGC GGATGGGACT GCACGCTGGA AGACTTGCCG CATGCGCCCG CGGTGCGTCT CGGGCTTCGG CTGGTGAACG GTCTTGGCCA AGCCGCTGCC GAGCGCATCG AGGCGGCTCG GGCGGAGCGG CCGTTTCAGG ATGTCGAGGA TCTCGCGCTG CGCGCGAGCC TGGACCAGCC CACCCTGCGC GTCCTCGCGG GCGGTGACGC CCTGGCCAGC CTGGCCGGGC ATCGGCGCCA ACAAGTCTGG GACGCGGCCG GCCAGCACGC AGCGCCGGCG CTGCTCCGCG ATGCACCTGT CGGCGAGGCC ATGCTGGAGT TGCCTGAGGC GCCTGAAGGC GACGCAGTGG TGCAGGACTA CTCAGCCCTG GGCCTGACCC TTAGAAGCCA TCCTGTAGCG CTGCTGCGGC CGCAGCTGCG GCGCTACCAC ACGGCGGAGC AACTGGCGAA CGTGCGCGAT GGCTTTCGAC TTGCAGCCTG TGGCCTGGTC ACGCTTCGAC AGCAGCCTGG TACGGCAAAG GGCACGATTT TTGTTTCGAT CGAGGACGAG ACGGGCACGG TGCAGGTGAT CGTGTGGCCG CATGTGCGCG ACACTCAACG CGATGTTCTG CTGCGCGCGA AACTGCTGGG CGTCTACGGC ATTTGGCAGC GAGAGGGTGA GGTCTGCAAT TTGATTGCAC GTCGGTTGGT AGACCACACC TCTCTACTCG GAGAATTACG TACTAGCAGT CGAGACTTCA TGTAG
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Protein sequence | MSADETPSRS AGVPAYAELR CASSFSFLIG ASHPHELVER AAQLGYTALA LTDECSLAGI VRAHVAAKQC GLQLLVGAQF KVAPDGGMPP CTLTVLACDL EGYGNLCAFI TRLRRAAQKG TYELAARDLS GKDLAGCVVI CSPERMSAAI QLQTLAEWLL RHFMGRCWIG VEMLRQIDDE AWLARLRATS EASALPLVAT GDVHFHVRSR KPLQDTMTAV RLGRPLAECG LDLQPNAERH LRTRLRLAQT YPAELLEETL RVAARCDFSL DELRYNYPAE VVPPGETPAS HLRRLTYEGA ARRWPAGIPP KVQEIVEHEL SLIEDLRYEH YFLTVADIVD FARSRGILCQ GRGSAANSAV CYCLHVTEVD PARMSVLFER FLSRERNEPP DIDIDFENAR REEVIQYLYG KYGRERAALT AVVTSYRPRS ALRDVGKALG FDEGTVSALA KDHQWWEEDS VRDEQLQALG LDAEDLRVRQ LLELTEQLLG FPRHLSQHPG GFVLTQDPLC RMVPIENAAM EDRTVIQWDK DDLDAAGLLK VDVLALGMLT AIRKALVMVG QIRGLDDALD LQDIPAEDPA TYEMLCRADS IGVFQVESRA QMSMLPRLRP RCFYDLVVQV AIVRPGPIQG GMVHPYLDRR QGLVPVTYPS EALREVLGRT LGVPVFQEQV MQLAIVAAGF SAGEADGLRR AMAAWKRKGG LEKYHAKLVD GMLARGYERE YAERVFLQVY GFSEYGFPES HAASFALLVY ASSWIKRHHP AAFLAALLNS QPMGFYSPSQ LVQDARRHGV GVRAPDVLHS GWDCTLEDLP HAPAVRLGLR LVNGLGQAAA ERIEAARAER PFQDVEDLAL RASLDQPTLR VLAGGDALAS LAGHRRQQVW DAAGQHAAPA LLRDAPVGEA MLELPEAPEG DAVVQDYSAL GLTLRSHPVA LLRPQLRRYH TAEQLANVRD GFRLAACGLV TLRQQPGTAK GTIFVSIEDE TGTVQVIVWP HVRDTQRDVL LRAKLLGVYG IWQREGEVCN LIARRLVDHT SLLGELRTSS RDFM
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