| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2651 |
|---|
| Symbol | |
|---|
| ID | 4666067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2913264 |
|---|
| End bp | 2914040 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823854 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_970997 |
|---|
| Protein GI | 120611319 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0421465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCCGC TGCCCGCTTT CGCCGACAAC TACATCTGGA TGCTGCACGA CGGCCACTCG
GCCGCCGTGG TCGATCCAGG GGAGGCCGGC CCGGTGCTGC AGGCCCTGCA GCACCATGGC
CTGGCACTGC AGGCGATTCT AGTCACGCAC CACCACGGCG ATCATGTCGG CGGCGTGGCG
GCGCTGCGCG AGGCTACCGG CGCACCCGTG TACGGCCCGG CGCGCGAATC CATTCCCCAG
CCGGCGCAGC CGCTGGCCGA TGGCGACACG CTGCAGGTGC TGGGCCTGCG CCTGTCCGTG
ATCGACGTGC CCGGCCACAC GGCGGGGCAC ATCGCCTACC ACGCCGCGGA CGCCGCGGGC
GGCCCGCTGC TCTTCTGCGG CGACACGCTG TTTTCCGGCG GGTGCGGCCG GCTCTTCGAG
GGCACCCCCG CCCAGATGCA GCATTCGCTC GACCGGCTCG GGGCGCTGCC GCCGGAGACG
CGGGTGTGCT GCGCCCACGA ATACACACTC TCGAACCTCG CTTTCGCGCG GGCCGTGGAA
CCCGGCAACG CGGCGCTGCT CCAGTACAGC CATGACTGCG AGGCGCTCCG CGCCGCCGGG
CAGCCCACCC TGCCCTCGCG GCTCGGCACG GAGCATGCCG TGAACCCCTT CCTGCGGGCG
CGGGAGCCCG CCGTGGCCCG CGCGGCGCAG GGCTTCGACC CGCGTACCGA CGCCGCCGAC
CCGGCCTCGG TGCTGGCGGC GCTGCGCCAG TGGAAAAACG AATTCCGACC GACCTGA
|
|---|
| Protein sequence | MLPLPAFADN YIWMLHDGHS AAVVDPGEAG PVLQALQHHG LALQAILVTH HHGDHVGGVA
ALREATGAPV YGPARESIPQ PAQPLADGDT LQVLGLRLSV IDVPGHTAGH IAYHAADAAG
GPLLFCGDTL FSGGCGRLFE GTPAQMQHSL DRLGALPPET RVCCAHEYTL SNLAFARAVE
PGNAALLQYS HDCEALRAAG QPTLPSRLGT EHAVNPFLRA REPAVARAAQ GFDPRTDAAD
PASVLAALRQ WKNEFRPT
|
|---|
| |