| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2633 |
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| Symbol | |
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| ID | 4665688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2886627 |
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| End bp | 2888003 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639823836 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_970979 |
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| Protein GI | 120611301 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0913646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0762555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCG AGCGCGCCCA GGTCGCGCGC CACGCGGCCA CCGTCCTGGC GGGGCAACTC
GCCGTGATGG CGTTCGGCGT GACCGACACC ATCGTCGCCG GCCGCCATGC GCCCTCCTCC
CTGGCCGCGC TCTCGATCGG CTCCGCCGTC TATGTGAGCG TCTATGTCGC CCTCATGGGC
GTGCTGCAGG CGCTGCTGCC CATCTGGGCG GAACAGCGCG GCGCCGGACA CACCACGGAG
ATCGGGCGCA CGGTGCGCCA GGCGCTGTAC CTTTGCGCCC TGGCGAGCCT GCTGGGCATG
GTCGTGCTGC TGTCGCCCGG GGCCATCCTG CGCTGGACGC AGGTGCCGGC CGAGCTGCGC
GCGGAGGTGG GCCGCTACCT CACGGTGCTG GCCGCGGCGC TGCCTCCGGC ACTGGCCTTC
CGGCTCTACA CCACGCTCAA CCAGGCCCTG GGGCGCCCCC AGCTGGTCAC CTGGCTGCAA
TTGGGTTCGC TGGCCGTGAA GATCCCGCTG TCCATCGGCT TCACCTTCGG GTTCGCGGGC
CTGCCCGCGC AGGGCGCCGT CGGGTGCGCC TGGGCCACGC TCGTCGTGAA CTACCTGCTG
CTGGGCATCG CGCTGTGGCT GGTCCGCTCG TCGCCGGTGT ATGCGCCGCT CTCGCTGTGG
AAGCGCATGG AGCGCCCCGA CCCCGCGCAG ATCGGGCACT TCGCGCGGCT GGGCGTGCCT
GCGGGACTGG CCGTGATGGT GGAAGTCACC TCGTTCACGC TGATGGCGCT GTTCATCGCC
CGGCAGGGAA CGGTCGCCGC CGCGGCGCAC CAGATCGCCT CGAATCTCAC CGCCGTGCTC
TACATGGTCC CGCTCTCGCT GGCCATCGCC ACCAGCGCCC GGATCAGCTA CTGGCGCGGC
CGTGCCGACG AGGCCCTCGC CCGGCAGGTG GCGTGGATGG GGCTGCGCAT GGCGGGCGCC
ACCGCCCTCG TCCTGTCGGG ACTGGCCCTC GCGGCACGCG AAGGCCTGGC GGGCCTCTAT
ACGTCCTCAC CCGAGGTGCT GGCGATGGCC CGCGGGCTGC TGGCCTGGGC CGCGGCCTAC
CACGTCGCCG ATGCGCTGCA GACCTTCTGC GCATTCGCCC TGCGCTGCTA CCGGATCACC
ATCGCTCCGC TGGCCACTTA CGGGGTACTG CTCTGGGGCG CCGGGCTGCC GGCGGGCTAT
GTACTGGCCT ACGTGGGCTT CGCCGGACAT CCGCCGCAGC AGTCGCCCGC CGCCTTCTGG
ATCGGCGGGG CGCTGGCGCT GGGACTGACG GCCGCGCTGT TCATTGCGAT GCTGGCGAGG
GCCTTGCGGA AGGCCCGTTC ATCGGGTCCG CGCCCCGCTC CGGCAGGATG GGCTTAG
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| Protein sequence | MPSERAQVAR HAATVLAGQL AVMAFGVTDT IVAGRHAPSS LAALSIGSAV YVSVYVALMG
VLQALLPIWA EQRGAGHTTE IGRTVRQALY LCALASLLGM VVLLSPGAIL RWTQVPAELR
AEVGRYLTVL AAALPPALAF RLYTTLNQAL GRPQLVTWLQ LGSLAVKIPL SIGFTFGFAG
LPAQGAVGCA WATLVVNYLL LGIALWLVRS SPVYAPLSLW KRMERPDPAQ IGHFARLGVP
AGLAVMVEVT SFTLMALFIA RQGTVAAAAH QIASNLTAVL YMVPLSLAIA TSARISYWRG
RADEALARQV AWMGLRMAGA TALVLSGLAL AAREGLAGLY TSSPEVLAMA RGLLAWAAAY
HVADALQTFC AFALRCYRIT IAPLATYGVL LWGAGLPAGY VLAYVGFAGH PPQQSPAAFW
IGGALALGLT AALFIAMLAR ALRKARSSGP RPAPAGWA
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