| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2627 |
|---|
| Symbol | |
|---|
| ID | 4666587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2880996 |
|---|
| End bp | 2882009 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823830 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_970973 |
|---|
| Protein GI | 120611295 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.107614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC CTCCCGCGAC GCCGCTGCAG CGCAGCGCCA GCGCCCCCCG AACCACTCCA
CCTCCCCGCG CGCCACTGCT CTCCGGAGCG GTGGCGGACC GCATTTTCGC GGGGCTCGCC
CGGGGCGCTG CCATGCTGAC CCTGGCGCTG CTGATCGGCA TCCTGGTCTC GCTGGTGATC
GGCGCGTGGC CGTCCATACA GACATACGGC GTGAGCTTCC TCGGCCGCAG CGTCTGGGAC
CCGGTGCAGA ACGACTACGG CGGCCTGGTC ATGATCTACG GCACGCTGGC CACGTCGATC
ATCGCGCTGC TCATCGCCGT GCCCGTGAGC TTCGGCATCG CGCTCTTCCT CACGGAACTG
TCCCCCGCGT GGCTCAAGCG GCCCCTGGGC ACCGCCATCG AGCTGCTGGC CGCCGTGCCC
TCCATCGTCT ATGGCATGTG GGGCCTGATG GTGTTCGGGC CCATCCTCGC CACCTGGGTG
CAGCAGCCCC TGCAGTCGCT GCTGTCGGGC GTTCCCTACC TGGGCGCACT GGTGTCCGGC
CCGCCCGTGG GCATCGGCAT CCTTTCGGCC GGGATCATCC TGGCCATCAT GATCATCCCG
TTCATCGCCT CGGTGATGCG CGACGTGTTC GAAGTCACTC CCGCGCTGCT GAAGGAGTCC
GCCTACGGCC TGGGCTCGAC GACCTGGGAA GTGGTGTGGA AGGTGGTCCT GCCCTATACG
AAAACCGGGG TGCTGGGCGG CATCATGCTG GGCCTGGGCC GCGCCCTGGG CGAGACGATG
GCCGTCACCT TCGTGATCGG CAACATGAAC CAGCTCGATT CGCTGTCGGT CTTCCAGGCC
GCCAACAGCA TCACCTCGGC GCTGGCCAAT GAATTCGCGG AAGCCGGCGA AGGCCTGCAC
CAGGCGTCGC TGATCTATCT GGGCCTGGTG CTGTTCTTCA TCACCTTCGT GGTGCTGTCG
CTGTCCAAGG TGCTGCTGTC GCGCCTGCAG AAGAACGAAG GAGCGCGCTC GTGA
|
|---|
| Protein sequence | MSAPPATPLQ RSASAPRTTP PPRAPLLSGA VADRIFAGLA RGAAMLTLAL LIGILVSLVI
GAWPSIQTYG VSFLGRSVWD PVQNDYGGLV MIYGTLATSI IALLIAVPVS FGIALFLTEL
SPAWLKRPLG TAIELLAAVP SIVYGMWGLM VFGPILATWV QQPLQSLLSG VPYLGALVSG
PPVGIGILSA GIILAIMIIP FIASVMRDVF EVTPALLKES AYGLGSTTWE VVWKVVLPYT
KTGVLGGIML GLGRALGETM AVTFVIGNMN QLDSLSVFQA ANSITSALAN EFAEAGEGLH
QASLIYLGLV LFFITFVVLS LSKVLLSRLQ KNEGARS
|
|---|
| |