| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2594 |
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| Symbol | |
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| ID | 4669270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2839635 |
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| End bp | 2840930 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823797 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_970940 |
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| Protein GI | 120611262 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.149006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC CACTCCTGAT CCTGTGCGTG TCGTTCACGC TGTTCCTGCT GCTGGGCGTG
CCGGTGGCGT TCTCCATCGG CCTGTCGGCC CTGGCCACGC TGGCCTATGA AGGCCTGCCG
CTGGAAGTGG GCTTCCAGCA GATGACCTCC GGCATGGGGA TCTTCTCGTT CCTGGCGATC
CCGTTCTTCA TCTTCGCGGG CGAGCTCATG CTGTATGGCG GCATCGCCGA CCGCATCGTC
AATTTCGCGC GGGCCCTGGT GGGCCACGTG CGCGGCGGCC TGGGCATGTC CAACGTGGTG
GCCTGCACGC TGTTCGGCGG GGTTTCGGGC TCGCCGGTGG CCGATGTGTC CGCGATGGGC
GCGGTGATGA TTCCCATGAT GAAGAAAGAG GGCTACCACG CCGACTACGC CGTGAACGTG
ACGACGCACG CGGCGCTGGT GGGCGCGCTG ATGCCGACGA GCCACAACCT CATCATCTAC
TCGCTCGCCG CGGGCGGCAA GGTGTCGATC GCGGCGCTGA TCCTGGCGGC ACTGATTCCC
GCCCTGGTGC TCACGATCAG CAATCTGGCG GCGGCGTACC TCGTGGCCGT GAAACGCGGC
TACCCGAAGG GCACGTTCCC GGGCTGGGAC ATCGTTGCCC GCTCGTTCGC GGCGGCGCTG
CCGGGCCTCT TCATCGTCGT GCTGATCCTC GGGGGCATCC TCTCGGGCAT CTTCACCGCG
ACCGAATCGG CGGCGGTGGC GGTGCTCTAC GCGCTGGCGC TGACCATCTT CCTCTACCGC
ACTTTAACGC GGGAGCATTT CATCAAGGCT GCCTCCAAGG CCGTGCGCAC CACGGGCGTG
ATCCTGCTGC TGATCGGCAT CTCCAGCACT TTCGGCTACC TCATCAGCCT CTACGGCGTG
GCAGAGCTGA CGGGCGAGAT GCTGTCGCAG GTGACCAGCA CGCCCTGGGT GATCTTCCTG
CTCATCAACA TCATCCTGTT CGTGCTGGGC ACCTTCCTGG ACATGGCGGC GACCATCCTG
CTGTGCACGC CCATCTTCCT GCCGATCGCG CAGCACTACG GCATGAGCTC GGTGCAGTTC
GGCATCGTGA TGCTGATCAA CTGCGCGCTG GGCCTGAACA CGCCGCCCGT GGGAACGACG
CAGTTCGTGG GCTGCGCGAT CGGCGGGGTG TCGGTGGGCA CGGTGATGCG GACCATCTGG
CCGTTCTACG GCGCACTGAT CTTCGCGCTC GCGCTGGTCA CCTTCGTGCC GTCGTTCTCG
ACCTGGCTGC CCAGCATGTT CATGGCGGTG CGCTGA
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| Protein sequence | MTVPLLILCV SFTLFLLLGV PVAFSIGLSA LATLAYEGLP LEVGFQQMTS GMGIFSFLAI
PFFIFAGELM LYGGIADRIV NFARALVGHV RGGLGMSNVV ACTLFGGVSG SPVADVSAMG
AVMIPMMKKE GYHADYAVNV TTHAALVGAL MPTSHNLIIY SLAAGGKVSI AALILAALIP
ALVLTISNLA AAYLVAVKRG YPKGTFPGWD IVARSFAAAL PGLFIVVLIL GGILSGIFTA
TESAAVAVLY ALALTIFLYR TLTREHFIKA ASKAVRTTGV ILLLIGISST FGYLISLYGV
AELTGEMLSQ VTSTPWVIFL LINIILFVLG TFLDMAATIL LCTPIFLPIA QHYGMSSVQF
GIVMLINCAL GLNTPPVGTT QFVGCAIGGV SVGTVMRTIW PFYGALIFAL ALVTFVPSFS
TWLPSMFMAV R
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