| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2578 |
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| Symbol | |
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| ID | 4668421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2825716 |
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| End bp | 2826996 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823781 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_970924 |
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| Protein GI | 120611246 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0148068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA ACCCCATCGA ACCGCAATTC CCCGCCGATG CAGTACGGCA GCCCTCCTCC
CCATGGCGCG GCGCCACGGC CAGCCTGGCA CTGTCCATGT TGCTGGCCTC GCTGGGAACC
AGCATCGCCA ACATCGCGTT GCCTGCGCTG GCCGGTGCCT TCGCACGGCC CTTCCCGCAG
GTGCAGGCGG TCGTCGTCGC CTATCTCGCA GGGCTGACCG TTTCGGTGCT CATCGCAGGC
CATCTGGGAG ATCGCCACGG CCTCAAGCCC ACGCTGCTCG CGGGCCTTGC CCTGTTCGCC
ACCGGAGCGC TGCTCTGCGG CATCGCGCCA AGCCTCGGAC TGCTCACCGC GGCCAGGGTG
CTGCAGGGCG TCGGCGCGGC CTTCCTGATG ACGCTGTCCA TGGCGCTCAT GCGCGAAACC
GCGGATCCGG AACGGCTGGG CCGGGCCATG GGCATGCTGG GTACGGTGTC GGCAATCGGA
ACGGCCCTCG GCCCCTCGCT GGGCGGCATG CTGGTATCGA CGGCGGGGTG GCGCAGCATC
TTCCTGGTGC AGGTGCCGCT GACGCTCCTG GCGGGAGCCC TGACCTTCTC CTGGCTGCCC
CATGGCGGGC CCGGGCGCGC AGGGCCTAAG CCATCCTGGA TGCACGCCCT GGACCGGCGC
ATGGTTTCCC CGCTCCTGGT CAATGGATCG GTTGCGGCGG TCATGATGGC GACGCTCGTG
GTCGGCCCGT TCTACCTGGG CACGGGCCTG GGCCTCAAGG AAACGCAGGT GGGCCTGGTG
ATGGCGGTGG GGCCCGTGAT CTCGATCTTC GGCGGGATTC CTGCGGGCCG GAGGGTCGAT
GCCTGGGGAA GCCGGAAGGT GCTCGCGATA GGCCTGGGCC TGCTGGCCTG CGGAGCCTTC
CTCCTGTCCC TGCTTCCCGG ATGGATCGGC GTGGCCGGCT ACCTGCTCGC CATCGCGGCC
CTGACGCCCG GCTACCAGCT GTTCCAGGCC GCCAACAACA CGGCGATGCT GGCCGATGTC
CCGCAGAACC GGCGCGGCAC GGTTTCGGGA CTGCTGGGCC TTTCGCGGAA CCTGGGCCTG
ATCGCGGGAG CCTCCTTGAT GGGCTCCGTC TTCGCGTTCG GCGCAGGCAC GGCCGACCTC
CGCCACGCCA CCCCGCAGGC CATGGCCGAC GGACTGCGGC TGACGTTCGC GGTAGCGGGC
ATCGGGATGC TGGTGGCGAT CGCCATCTCG TTCTCCTGGT CCGGTGGGCG CCGCAAGGGC
AACGGACCCA CTGGTCCATG A
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| Protein sequence | MAMNPIEPQF PADAVRQPSS PWRGATASLA LSMLLASLGT SIANIALPAL AGAFARPFPQ
VQAVVVAYLA GLTVSVLIAG HLGDRHGLKP TLLAGLALFA TGALLCGIAP SLGLLTAARV
LQGVGAAFLM TLSMALMRET ADPERLGRAM GMLGTVSAIG TALGPSLGGM LVSTAGWRSI
FLVQVPLTLL AGALTFSWLP HGGPGRAGPK PSWMHALDRR MVSPLLVNGS VAAVMMATLV
VGPFYLGTGL GLKETQVGLV MAVGPVISIF GGIPAGRRVD AWGSRKVLAI GLGLLACGAF
LLSLLPGWIG VAGYLLAIAA LTPGYQLFQA ANNTAMLADV PQNRRGTVSG LLGLSRNLGL
IAGASLMGSV FAFGAGTADL RHATPQAMAD GLRLTFAVAG IGMLVAIAIS FSWSGGRRKG
NGPTGP
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