| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2522 |
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| Symbol | |
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| ID | 4668749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2765719 |
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| End bp | 2767875 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639823725 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_970869 |
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| Protein GI | 120611191 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0154328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTACA CGGTGGTGGG CGGCGAGACG CTCAAGGACA TCGCGCGCAA CGTGCTGGGC
GATGCGAGCC TGTGGTGGCG CATCGCAGAC GCCAACAGCC TGGCGGTGTC GGGCGATGGC
GCCTTGACGG CAGGGCAGAC GCTGACGGTG CCCAAGCTGT CGCTGAATGC GAACAGCGTG
GAGACGTTCC AGCCGTACGA CCCGAGCCAG GCGATGGGGA GCATGGATCC GGTGTTGCCG
GTGCCGGCGA ACGGGGGGGA CTGCGGGATC GTCGGGCAGA TCATTGTGGT CGTCGTCAGT
GTCGTGGTCA GCATTTTTGC TGGCCCCGTC ATTGGCAATC TCGCAGGGCA GATGATGGGT
AACCTGGTGG GGTCCCAGAA CGGCATCAGT TGGAAGAGTC TTGCGTTGTC GGCGATCAGT
GCAGGCGTTG CCTCAGGAGT GGAGTATTTC TCGGGCTTCA GCGGAGCCAG TGCGGGCTGG
CAGGGCGCCG CTGTACAGAT GGGCACGACG AACCTGATTA CGCAGGGCAT TGGCGTGGCG
ACGGGGTTGC AAGACCGCTT CGATTGGCGG GGTGTGGCCG CGAGCGCGGC GGGCGCGGCT
GCGGGCAGCG CGGCCGGGAG TGCGCTGCAG GGAGCTACGT GCCTCGATGG GCTTGGCCAG
ACGGGGGCCG CCTGGGCCCG AGGGACGCTC AGCGGGATGG CTGCGGGTAT GACCGCGGCC
GTGGCGCGAG GCGGGCGGGT GAGCATCCAG CAAGTGGCTG TGGATGCTTT CGGGAACGCC
CTGGGACAAC AAATGGGCGC CGCCATCCTT GATACCGGCG CTAATGTCCT GGCAGGTGCG
CAGACTCAGC AACCCGGCGG CAATCCGAAC CAGGCCATCG CGCAGCGTTA TCAAGCTGCC
GGAGTTGATC CGATCACGCA GGCATACGAC TACATGCAGT CGCATCCCCA GTCATCGATG
ACATTCGGTA ATGCGCTGGA ATACTACGGT GACCAAGCCG CGAGTCCCTA TTTACCATCG
CTCATTGCAG ACCCGCAGAT GATGGGGGGC GGAAAAATGC GCAATGGGGT TTACCAAGAC
GAGTGGTCGC AATATACAGA ATGGGATAGT GGTGCGCGGG CAATCCAGGT TTTGCAGCAT
GGCCTGCCGG TAGGCACGGC ACTTGCTCCG TGGGTGGCAC CGCAAGATGG TTTCGAGCAA
GCCCGGACGA ACCTGCGAGA GCAGTATGCA CAGATAGAGG CAGAGGCCAC CAACCCGCTG
GCAGCGGTTC TTGGCAGATT AGGGCGTGTC GCTGGAGAAG GTGCCTATGA CTTTGTTGAT
GGATTCAGGC ACTTGGCAAC TCTGGCAACG GATGACAAAG CCCGCCGGAT GGCGTTAGCC
AGAGGAGCAT ATGCGCTGAC AAACCCTGGT GAAACAGCCA GAGGAGTCGT GATGGGTGGC
GTGAACTATC TGCGAAGCAC CAGCGCAGAC AAGATGGGGG AGGATGCCCT GCGGTTCGCT
GTAGGTGGCA TACTTTCCGC AGGAGCAGGC AAGGTATTTT CTGCGGCTGG GAATATGGCT
TTGGTTGAGG AGGCCACGGC CAGTAGATTA GTAGGTGGCG TTGAGAAGGG TACATTGTCG
CGTGGGGAAG AGTTACGTCA GCGTTACGGC CATCTGAGTG CTGAAGAGCG GCGTGCCATC
ATTTGGGATA GAACAGAAGA AATTGCTCGC CGCCAACTTG AGAAGCTAGA AGCATCAAAT
TCAGGCGCAC ATTTCATGTC CAGGCACTCT CCTCAAGTTG ATTTGTACGA CCAACTCGTC
TCTGCCGCTA CTGGCATGCG GCCTGATGGT AAAATTATGG TCGGAGTGAA CAATAGATTT
GCCGTGGATT CCACTCAATT TCTTTCGAAT AAAGATATGC TATACGGGAT AAAACGCGCT
GAACGTATTC AACAATATGC CATAAGCACA GGAAACCCGA TAAATAATTA CATCTCCTTA
AAATTCGATT ATAATGTTGG TGAAGGTTTT GTAAAAAATA CCCCTCTGTT TGGTGGCGAT
TTGGCGAATT TTTACAAGCA AACCAAGTTT GCAAATTTTG GAATTGACTC TACTAGCGGG
CGCGCAATAA CAGCTTATCC TGTGATCTCA AAAAGTAGCT TGGGTATAGT TTATTGA
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| Protein sequence | MAYTVVGGET LKDIARNVLG DASLWWRIAD ANSLAVSGDG ALTAGQTLTV PKLSLNANSV
ETFQPYDPSQ AMGSMDPVLP VPANGGDCGI VGQIIVVVVS VVVSIFAGPV IGNLAGQMMG
NLVGSQNGIS WKSLALSAIS AGVASGVEYF SGFSGASAGW QGAAVQMGTT NLITQGIGVA
TGLQDRFDWR GVAASAAGAA AGSAAGSALQ GATCLDGLGQ TGAAWARGTL SGMAAGMTAA
VARGGRVSIQ QVAVDAFGNA LGQQMGAAIL DTGANVLAGA QTQQPGGNPN QAIAQRYQAA
GVDPITQAYD YMQSHPQSSM TFGNALEYYG DQAASPYLPS LIADPQMMGG GKMRNGVYQD
EWSQYTEWDS GARAIQVLQH GLPVGTALAP WVAPQDGFEQ ARTNLREQYA QIEAEATNPL
AAVLGRLGRV AGEGAYDFVD GFRHLATLAT DDKARRMALA RGAYALTNPG ETARGVVMGG
VNYLRSTSAD KMGEDALRFA VGGILSAGAG KVFSAAGNMA LVEEATASRL VGGVEKGTLS
RGEELRQRYG HLSAEERRAI IWDRTEEIAR RQLEKLEASN SGAHFMSRHS PQVDLYDQLV
SAATGMRPDG KIMVGVNNRF AVDSTQFLSN KDMLYGIKRA ERIQQYAIST GNPINNYISL
KFDYNVGEGF VKNTPLFGGD LANFYKQTKF ANFGIDSTSG RAITAYPVIS KSSLGIVY
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