| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2485 |
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| Symbol | |
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| ID | 4665495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2718549 |
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| End bp | 2719751 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823690 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_970834 |
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| Protein GI | 120611156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.354726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.111472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCC TGCTCACCCA TTTGCAGCCC TATCCGTTCG AGCGGCTGCG GCAGCTCTTC
GCGGGGGTGC AGCCCCCCGC CGGCCTCCCG GCGATCAGCC TCGGCATGGG CGAACCCCGC
CACCCCACGC CGGCCTTCAT CCAGCAGGCC CTGACGGACC ACCTGGGCGG CCTCGCCAGC
TACCCCGCCA CCGCGGGCGA TCCCCGCCTG CGCGAAGCCT GCGCGCAATG GCTGCACCGG
CGCTACGGCA TCGCGGTGGA CGCCGCGACC CAGGTCCTGC CCGTGAACGG CTCCCGCGAG
GCCCTGTTCG CGTTCGCCCA GACGGTGATC GACCCCACGC GCGAAGGCGC CACCGTGGTC
TGCCCCAATC CCTTCTACCA AATCTACGAA GGCGCCGCCC TGCTGTCGGG CGCGCAACCG
TACTACGCCC CCAGCGACCC GGCACGCAAT TTCGCAGTGG ACTGGGATGC CGTGCCCGAA
GACGTCTGGA AGCGCACGCA ACTGCTCTTC GTCTGCTCGC CGGGCAACCC CACGGGTGCC
GTGATGCCGA TGGCCGAGTG GGAAAAGCTC TTCGCGCTCA GCGACCGCCA CGGCTTCGTG
ATCGCCTCGG ACGAGTGCTA CAGCGAGATC TACTTCCAGG GCGGCCCGCC GCTCGGCGGC
CTGGAAGCCG CGGCGCGCCT GGGCCGCACG GATTTCCGCA ACCTCGTCGC CTTCACCAGC
CTGTCCAAGC GCAGCAACGT GCCCGGCCTG CGCAGCGGCT TCGTGGCGGG CGACGCGGCC
CTGATGAAGG CTTTCCTGCT CTACCGCACC TACCACGGCA GCGCCATGGG GCCGGCCGTG
CAGGGCGCCA GCATCGCCGC CTGGAGCGAC GAGGCGCACG TGGAAGAGAA CCGCGCCCTC
TACCGGAGCA AGTTCGAGCA GGTCACGCCG CTGCTGGCGC AGGTGATGGA CGTCGCCCTG
CCCGATGCCG GCTTCTACCT GTGGGCCCGC GTGCCCGAGC GCCTGGGGAT GGACGACGCG
GCATTCGCCC GCGCCCTCCT CGCTCAATAC AATGTGACCG TGCTGCCGGG CAGCTACCTC
GCGCGCGAAT CCGGCGGCCG CAATCCCGGC GCCGGCCGCG TGCGCATGGC GCTCGTGGCC
GAGGTCGAGG AATGCCTCGA AGCCGCGCGC CGCATCGTGC AATTCATCCA ATCCCATCCC
TGA
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| Protein sequence | MNPLLTHLQP YPFERLRQLF AGVQPPAGLP AISLGMGEPR HPTPAFIQQA LTDHLGGLAS
YPATAGDPRL REACAQWLHR RYGIAVDAAT QVLPVNGSRE ALFAFAQTVI DPTREGATVV
CPNPFYQIYE GAALLSGAQP YYAPSDPARN FAVDWDAVPE DVWKRTQLLF VCSPGNPTGA
VMPMAEWEKL FALSDRHGFV IASDECYSEI YFQGGPPLGG LEAAARLGRT DFRNLVAFTS
LSKRSNVPGL RSGFVAGDAA LMKAFLLYRT YHGSAMGPAV QGASIAAWSD EAHVEENRAL
YRSKFEQVTP LLAQVMDVAL PDAGFYLWAR VPERLGMDDA AFARALLAQY NVTVLPGSYL
ARESGGRNPG AGRVRMALVA EVEECLEAAR RIVQFIQSHP
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