| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2484 |
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| Symbol | dapD |
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| ID | 4665125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2717710 |
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| End bp | 2718534 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639823689 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_970833 |
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| Protein GI | 120611155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.396113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.251831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC AACTGCAGAA CATCATCGAC ACCGCCTGGG AGAACCGCGC GAGCCTCTCG
CCCTCCGCCG CCCCGCGCGA GGTGCAGGAC GCCGTCGAGC ACGTGATCGC CGAACTCGAT
GCCGGCAAGC TGCGCGTGGC CACCCGCGAG GGCGTCGGCC AGTGGACCGT GCACCAGTGG
ATCAAGAAGG CCGTGCTGCT GTCGTTCCGC CTGAAGGACA ACGAGCTGAT CGAGGCCGGC
AGCCTCGGCT TCTACGACAA GGTTCCGACC AAGTTCGCGG GCCGTTCGGC CGCCGAGATG
GCCGCCACCG GCGTGCGCGT GGTGCCGCCG GCCGTGGCGC GCCGCGGCAG CTTCATCGCC
AAGGGCGCGA TCCTCATGCC CAGCTACGTG AACATCGGCG CGTACGTGGA CGAAGGCACC
ATGGTCGATA CCTGGGCCAC CGTCGGCTCC TGCGCGCAGG TGGGCAAGCA CGTGCACCTG
TCCGGCGGCG TGGGCCTGGG CGGCGTGCTG GAACCCCTGC AGGCCAACCC GACCATCATC
GAGGACAACT GCTTCATCGG CGCGCGCTCG GAAATCGTCG AAGGCGTGAT CGTCGAAGAG
AACTCCGTCA TCTCCATGGG CGTGTACATC GGCCAGAGCA CCCCCATCTA CGACCGCGCC
ACCGATACCG TGAGCTACGG CCGCGTGCCG GCGGGCTCGG TGGTGGTGAG CGGCAGCCTG
CCCAAGGGCG ACGGCAAGTA CAGCATGTAC GCCGCCATCA TCGTCAAGAA GGTGGACGCC
AAGACCCGCT CCACCACCAG CCTGAACGAC CTGCTGCGCG ACTGA
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| Protein sequence | MTQQLQNIID TAWENRASLS PSAAPREVQD AVEHVIAELD AGKLRVATRE GVGQWTVHQW
IKKAVLLSFR LKDNELIEAG SLGFYDKVPT KFAGRSAAEM AATGVRVVPP AVARRGSFIA
KGAILMPSYV NIGAYVDEGT MVDTWATVGS CAQVGKHVHL SGGVGLGGVL EPLQANPTII
EDNCFIGARS EIVEGVIVEE NSVISMGVYI GQSTPIYDRA TDTVSYGRVP AGSVVVSGSL
PKGDGKYSMY AAIIVKKVDA KTRSTTSLND LLRD
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