| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2462 |
|---|
| Symbol | aceE |
|---|
| ID | 4669076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2686571 |
|---|
| End bp | 2689294 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823667 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_970811 |
|---|
| Protein GI | 120611133 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0130543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTC AGACCGACCC TCAGGCCGGA AAAACCGCGA CGTCCGCCCC CGATACCGAC
CAACAGGAGA CCCGCGAGTG GATGGACGCA CTGTCTGCCG TGATCGACCG CGAAGGCGCT
GAACGGGCCC ACTTCCTGCT CGAGCAATTG CTCGAACACG CGCGCCAGAG CAGCATCGAC
ATGCCGTTCT CCGCCAACAC GGGCTACGTG AACACGATCG AGCCCAGCCA GGAGGCACGC
TGCCCCGGCA ATCTGGAAAT CGAAGCGCGC CTGCGCGCCT ACATGCGCTG GAACGCCATG
GCGATGGTGG TCAAAGCCAA CCGCCACCAT CCTCCCGAAG GCGGCGACCT GGGCGGCCAC
ATCGGCTCCT TCGCCTCCCT GGCCAACATG TTCGGCGCAG GTTTCAACCA CTTCTGGCAC
GCAGAGAGCG AGAACCACGG CGGCGACCTG CTGTACATCC AGGGCCATGT GTCCCCCGGC
ATCTATGCGC GCGCCTACCT GGAAGGCCGC CTGACCGAGG AACAACTGCT GAACTTCCGC
CAGGAAGTGG ACGGCAAGGG TCTCTCCAGC TACCCGCATC CCAAGCTGAT GCCCGAGTTC
TGGCAGTTCC CGACGGTCTC GATGGGCCTG GGCCCGCTGA TGGCCATCTA CCAGGCCCGT
TTCCTCAAAT ATCTGCAGGC CCGCGGCATC GCCAACACCG AGAACCGCAA GGTCTGGGTG
TTCTGCGGCG ACGGCGAGAT GGACGAGGTG GAATCCCTGG GCGCGATCGG CCTGGCCGCG
CGCGAGAACC TCGACAACCT GATCTTCGTC ATCAACTGCA ACCTGCAGCG CCTGGACGGC
CCGGTGCGCG GCAACGGCAA GATCATCCAG GAGCTGGAAG GCGAATTCCG CGGCTCCGGC
TGGAACGTGA TCAAGCTGCT GTGGGGCAAG GGCTGGGACG ACCTGCTGGC CCGCGACAAG
GACGGCGCGC TGCGCAAGAT CATGATGGAC TGCAACGACG GGGACTACCA GTCGTTCAAG
GCCAATGACG GCGCCTACGT GCGCAAGAAC TTCTTCGGCC GCGATCCGCG CACGCTGAAG
ATGGTCGAGC ACATGAGCGA CGACGAGATC TGGAACCTGC GCCGCGGCGG CCACGACGCG
CAGAAGGTCT ATGCGGCGTT CAAGGCGGCC AACGAGCACA AGGGCCAGCC CACGGTGCTG
CTGGTGAAGA CCGTCAAGGG CTTCGGCATG GGCAAGATCG GCGAGGGCAA GAACACCGTC
CACCAGACCA AGAAGCTCGG CGACGAGGAC ATCAAGGCCT TCCGCGACCG CTTCAACATT
CCGATTCCCG ACAGCCAGAT CGCCGACCTG CCGTTCTACA AGCCGGCCGA CGACACCCCG
GAAATGAAGT ACCTGCACGA GCGCCGCAAG GCCCTCGGCG GCTACCTGCC GCACCGCCGC
ACGAAGGCCG ACGAGAGCTT CACCGTGCCG TCGCTGGAAA CCTTCAAGGC CGTGCTCGAT
CCCACGCCCG AAGGCCGCGA GATCTCGACC ACGCAGGCCT ACGTGCGCTT CCTCACGCAG
CTGCTGCGCG ACCAGGCCAT CGGCCCGCGC GTGGTGCCCA TCCTGGTGGA CGAGGCCCGC
ACCTTCGGCA TGGAAGGCCT GTTCCGCCAG ATCGGCATCT ACAACCCGCA CGGCCAGCAG
TACACCCCGG TGGACAAGGA CCAGGTGATG TACTACCGCG AGGACAAGGC CGGCCAGATC
CTGCAGGAAG GCATCAACGA GGCCGGCGGC ATGTCCAGCT GGATCGCCGC GGCCACGTCG
TACAGCACGA ACAACCGGAT CATGATCCCG TTCTACGTGT ACTACTCGAT GTTCGGCTTC
CAGCGCGTCG GCGACCTGGC CTGGGCGGCC GGCGACATGC AGGCGCGGGG CTTCCTGCTG
GGCGGCACGT CGGGCCGCAC CACGCTGAAC GGCGAAGGCC TGCAGCACGA GGACGGCCAC
AGCCACATCC TGGCCAACAC GATTCCGAAC TGCATCAGCT ACGACCCGAC CTTCGCGCAC
GAAGTCGCCG TCATCATGCA CGACGGCCTG AAGCGCATGG TCGAGCGCCA GGAGAATGTC
TTTTACTACC TGACGCTGCT CAACGAGAAC TACGCCATGC CCGGCCTGCA GCCCGGCACG
GAAGAGCAGA TCATCAAGGG CATGTACCTC TGCAAACAGG CGCCGGCCCT CAAGAAGGGC
GCGCCCGCCG TGCAGCTGCT GGGCAGCGGC ACGATCCTGC GCGAGTCGTT CGTCGCCCAG
GAACTGCTGG AGAAGGACTG GGGCGTGGCC GCGTCCGTGT GGAGCTGCCC GAGCTTCAAC
GAGCTGACGC GCGACGGCCA GGAGGCGGAG CGCTGGAACC TGCTGCACCC CACGGAAACG
CCGCGCACGT CGTTCGTGGA GGAGCAGCTC GGCAAGACCG AGGGCCCGGT GATCGCTTCC
ACCGACTACA TGAAGGCGTA CGCCGAGCAG ATCCGTCCGT TCGTGCCCAA GGGCCGGACG
TACAAGGTGC TGGGCACCGA CGGCTTCGGC CGCAGCGACT TCCGCCGCAA GCTGCGCGAG
CATTTCGAGG TGGACCGCCA CTACATCGTC GTGGCCGCGC TCAAGGCCCT GGCCGAGGAT
GGCAAGCTGC CCGCTGCCAA GGTGGCCGAG GCCATCCAGA AGTACGGCAT CCAGGCCGAC
AAGGTGAACC CGCTGCACGC CTGA
|
|---|
| Protein sequence | MTAQTDPQAG KTATSAPDTD QQETREWMDA LSAVIDREGA ERAHFLLEQL LEHARQSSID
MPFSANTGYV NTIEPSQEAR CPGNLEIEAR LRAYMRWNAM AMVVKANRHH PPEGGDLGGH
IGSFASLANM FGAGFNHFWH AESENHGGDL LYIQGHVSPG IYARAYLEGR LTEEQLLNFR
QEVDGKGLSS YPHPKLMPEF WQFPTVSMGL GPLMAIYQAR FLKYLQARGI ANTENRKVWV
FCGDGEMDEV ESLGAIGLAA RENLDNLIFV INCNLQRLDG PVRGNGKIIQ ELEGEFRGSG
WNVIKLLWGK GWDDLLARDK DGALRKIMMD CNDGDYQSFK ANDGAYVRKN FFGRDPRTLK
MVEHMSDDEI WNLRRGGHDA QKVYAAFKAA NEHKGQPTVL LVKTVKGFGM GKIGEGKNTV
HQTKKLGDED IKAFRDRFNI PIPDSQIADL PFYKPADDTP EMKYLHERRK ALGGYLPHRR
TKADESFTVP SLETFKAVLD PTPEGREIST TQAYVRFLTQ LLRDQAIGPR VVPILVDEAR
TFGMEGLFRQ IGIYNPHGQQ YTPVDKDQVM YYREDKAGQI LQEGINEAGG MSSWIAAATS
YSTNNRIMIP FYVYYSMFGF QRVGDLAWAA GDMQARGFLL GGTSGRTTLN GEGLQHEDGH
SHILANTIPN CISYDPTFAH EVAVIMHDGL KRMVERQENV FYYLTLLNEN YAMPGLQPGT
EEQIIKGMYL CKQAPALKKG APAVQLLGSG TILRESFVAQ ELLEKDWGVA ASVWSCPSFN
ELTRDGQEAE RWNLLHPTET PRTSFVEEQL GKTEGPVIAS TDYMKAYAEQ IRPFVPKGRT
YKVLGTDGFG RSDFRRKLRE HFEVDRHYIV VAALKALAED GKLPAAKVAE AIQKYGIQAD
KVNPLHA
|
|---|
| |