Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2460 |
Symbol | |
ID | 4669231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2683208 |
End bp | 2683834 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639823665 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_970809 |
Protein GI | 120611131 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.293905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTGA CTCCCAAAAA AGGTACTGTC TACGTCGTGG ACGACGACGA GGCCGTGCGC GACTCGCTGC AATGGCTGCT GGAGGGCAAG GACTACCGCG TCCGCTGCTT CGACTCCGCC GAATCCTTCC TCTCACGCTA CGATCCACGC GAAGTGGCCT GCCTGATCGT TGACATCCGC ATGGGCGGCA TGACCGGGCT CGAACTGCAG GACCGCCTGC TCGAACGCAA GTCCCCCCTG CCCATCGTCT TCATCACCGG CCATGGCGAC GTGCCCATGG CCGTCAACAC CATGAAGAAG GGCGCGCTCG ACTTCATCCA GAAGCCCTTC AACGAGGACG AACTCGTCAG CCTCGTGGAC CGCATGCTCG ACCGGGCCCG CGAGTCCTTC GCCGGCCACC AGCAGGCCGC CAGCCGCGAC GCCCTGCTCT CCAAGCTCAC CGGGCGCGAA GCGCAGGTGC TCGAGCGCAT CGTCGCCGGC CGCCTGAACA AGCAGATCGC CGACGACCTG GGCATCAGCA TCAAGACCGT GGAAGCGCAC CGCGCCAACA TCATGGAAAA GCTGAACGCC AACACCGTGG CCGACCTGCT CAAGATCGCC CTGGGCCAGA ACGCGCCCAA GTCCTGA
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Protein sequence | MSLTPKKGTV YVVDDDEAVR DSLQWLLEGK DYRVRCFDSA ESFLSRYDPR EVACLIVDIR MGGMTGLELQ DRLLERKSPL PIVFITGHGD VPMAVNTMKK GALDFIQKPF NEDELVSLVD RMLDRARESF AGHQQAASRD ALLSKLTGRE AQVLERIVAG RLNKQIADDL GISIKTVEAH RANIMEKLNA NTVADLLKIA LGQNAPKS
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