Gene Aave_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2442 
Symbol 
ID4667756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2667321 
End bp2667857 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID639823645 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_970791 
Protein GI120611113 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCA CTACCAAAGG CCGTTTCGCG GTCACCGCAA TGATCGACCT GGCCCTCCGC 
CAGAACAATG GTCCCGTCAC GCTGGCGGCC ATCAGCCAGC GCCAGCAGAT TTCGCTGTCG
TACCTGGAGC AGCTCTTCGG CAAGCTGCGC CGCCATGAAC TCGTCGAATC CACCCGCGGC
CCGGGCGGCG GCTACACCCT GGCCCGCAAG GCGGCCGACA TCACCGTCGC CGACATCATC
GTGTCGGTGG ACGAACCCAT CGACGCCACG CAATGCGGCG GCAAGGAAAA CTGCCTGGGC
GAGGCGGGCC GCTGCATGAC GCACGAGCTG TGGGCCTCCC TGAACCAGCG CATGGTCGAG
TTCCTGGACT CCGTCACGCT GCAGAAGCTG GTGGACGACC AGATCGCCAA GGGCGTGCAG
ATCGAGGACA AGCCGGTGGT CCGCCGCGCC ATTTCCACGA CGCCGGTGGT CAAGCCCATC
CGCGTGAATG CACCCAACTC CGTGTTCGCC CTGGGCAACG CATTCGCCAA ATCCTGA
 
Protein sequence
MRLTTKGRFA VTAMIDLALR QNNGPVTLAA ISQRQQISLS YLEQLFGKLR RHELVESTRG 
PGGGYTLARK AADITVADII VSVDEPIDAT QCGGKENCLG EAGRCMTHEL WASLNQRMVE
FLDSVTLQKL VDDQIAKGVQ IEDKPVVRRA ISTTPVVKPI RVNAPNSVFA LGNAFAKS