| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2360 |
|---|
| Symbol | |
|---|
| ID | 4666076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2578644 |
|---|
| End bp | 2579156 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639823563 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970709 |
|---|
| Protein GI | 120611031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0425703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000154434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCCT CGCTCTACAC CCACCTCGCT GCTGCCGGCG CGGCGGCCGC GCTCGCCTGG
GCATTCCAAG GCGCGCGGAT GGATGCGGAG GTGGGCGAAG CCAACCTGCG GGCCACCACC
TTTCAACTCG ACGTGAGCAC CGCGCAGCGC GCCGCTGACG CCCGAGTCCG CGTCGCCGAG
AACGCGACCA GCACCAAGTA CCAAGGAGCC CTCAATGCCG CCCGAACCCG TGAGGCGCTG
CTGCGCCAGG AGCTTGACCT GCTGCGTGTT GCTTCTGACG GCCTGCGCGA CCAAGCCGCA
GATGCCGCCC GGCGACTTGC CGCATCTCCC CCCAGCACCA GCCGTGACTA CGCCCTTGCC
GTCAACGCCG TATACGACGA CTGCCGCGCA GCGTATGGCG ACATGGCAGC AAAAGCTGCA
GGCCACGCAA CTGATGTCCG AACCCTCCGG GACGCCTGGC CGGTGATCCC GCCGGGCCGG
CCGGATGCCG GCACCCAGGG AAGCACACCA TGA
|
|---|
| Protein sequence | MIPSLYTHLA AAGAAAALAW AFQGARMDAE VGEANLRATT FQLDVSTAQR AADARVRVAE
NATSTKYQGA LNAARTREAL LRQELDLLRV ASDGLRDQAA DAARRLAASP PSTSRDYALA
VNAVYDDCRA AYGDMAAKAA GHATDVRTLR DAWPVIPPGR PDAGTQGSTP
|
|---|
| |