Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2335 |
Symbol | |
ID | 4668767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2562387 |
End bp | 2563124 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639823539 |
Product | putative phage repressor |
Protein accession | YP_970685 |
Protein GI | 120611007 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00049871 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000160936 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCACTCG GCGCACGCAT CAGGTACTAC CGCAACAAGG CAGGGCTCAC GCTCGACCAA CTCTCCGAGC TTTCAGGCGT GGAAATGGGC ACGATCAGCG CCCTCGAGGT CCGCGACAGC ACCCGCTCGG CATACGCGCG CAAGATCGCT TCAGCGCTGG GGCTCACGGT GGATCAATTG GAGGACGAGT CCGCGGACCA CGACGTGGGC CCAGTGAAGG CAGCTCCGGT GCGTGCAGCC GAGCCTGACC CCCCCTATCT CGAATTGCCG GGCGATGGCC ACGAGGCCGG CGAACTGGTC ATCACCCAGT ACCAGGACAT CGGCGGCGCG ATGGGGCATG GCTTCAATCT CACCGACAAT CCGCCCGGGC ATATCCGATC GTGGCGCGTG ACGCCCGAAT GGTTGAGGCT CAATGTTCCC AACCACACCG GGGTGAAAAA CCTCTCCATC GTGACGGGGT TCGGCCCATC GATGAAGCCG ATGTTCAACC CCGGCGACCC GCTCCTAGTG GACACCGGCA TTCGAGTCAT CGACCACGAG GGCGTCTACT TCTTCCGAGT CGGGGACGAG GGCTTCATCA AGATCATCCA GCGTGTGCCC CAGTTCGACG GGCCGGGCAT CATCCTGCGG GTCATCTCGA AGAACCCGGA CTATCCCCCC TACGACCTTT CCCCCAAGAA CCCGCACTTC GAGGTTCTGG GCAAAGTCCT GACCGTCTGG CGAAGCGAGC AATACTGA
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Protein sequence | MALGARIRYY RNKAGLTLDQ LSELSGVEMG TISALEVRDS TRSAYARKIA SALGLTVDQL EDESADHDVG PVKAAPVRAA EPDPPYLELP GDGHEAGELV ITQYQDIGGA MGHGFNLTDN PPGHIRSWRV TPEWLRLNVP NHTGVKNLSI VTGFGPSMKP MFNPGDPLLV DTGIRVIDHE GVYFFRVGDE GFIKIIQRVP QFDGPGIILR VISKNPDYPP YDLSPKNPHF EVLGKVLTVW RSEQY
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