| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2274 |
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| Symbol | |
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| ID | 4665623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2503801 |
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| End bp | 2505036 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639823479 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_970626 |
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| Protein GI | 120610948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.670451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000383306 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCCA GTTCCCCCTC CTCTCCCGCG TCCGGCGCGC TGCATGCCCA GGCTCCGGCC
GGACTGTCCA CCCCCGTCCT GCTGCTCATG GCCACGGCCT GCGGCCTGTG CGCGGGAGCC
AACTATTTCA ACCAGCCCCT GCTGCATTCG ATCGCGGTGC AACTGGGCGT GAGCGAATCC
CGCGCCGCGT TCACCGTGAC GATCTCCCAG GTGTCGTACG CGGCGGGCCT GCTGCTGCTG
GTGCCTCTGG GCGACAAGCT GGAGCGGCGG CGGCTGGTGG TGGCGCTGAT GGCGCTCGCG
GCCTGCGGGC TGTTCCTGAG CGGCTTCGCC GGCAGCTTCG GCGCGCTGGC CGCCGGCACC
CTGATCACGG GGTTGTTCTC CGTGGCGGCG CAGGTGCTGG TGCCGATGGC GGCGGCGCTG
GCGTCGCCAG GGCGCAGCGG CCGCGCTGTG GGCCTGGTGA TGAGCGGCCT GCTGGTGGGC
ATCCTGGCGG CACGCAGCGT GGCGGGGCTG CTGTCGGGCG TGGGCGGATG GAGCCTGGTG
TACCGCGCGG GCGGCGTCGC CATGCTGGCG GTCGCGCTGG CGCTGTGGTT CGTGCTGCCG
GCACTGCGCA CGCCCCACCC GCCGAGCTAT GCGCAGGTGC TGCGCTCGCT GGCCACGCTG
GCGCGGCAGC ACCCGCGGCT GCGCAGCCGG GCACTGCTGG GCGGGCTGTC GTTCGGCTCG
GTGAGCGTGC TGTTTTCCAC GATGGCGCTG ATGCTGGCGG GGCCGTCCCA CCAACTGGGC
GATGCGCAGA TCGGGCTGGT GGGGCTGGCG GGCGTGGCGG GTGCGCTCAT GGCCAACTGG
GCGGGCCGCA TGGCCGACCG CGGCCACGAG CAGGGGACGA CCCGGGCTTC CGTGCTGCTC
GTGCTGGCCA GCTGGGGGGC GCTGTGGCTG GGCGGCACCA GCCTGCCGTG GTTCCTGGCG
GGCGTGCTGG CGATCGACCT GGCGCTGCAG GGCGTGCACA TCAGCAACCA GAACGTGATC
TACGCCCTGG CGCCGCAGGC GCGCTCGCGG CTCAACGCCG TCTATATGAC GACCTACTTC
GCCGGGGCCG CGCTCGGGTC CGCGCTGGGT TCGGCGGCAT GGCAGCACGG CGGCTGGGAC
GCCACCTGCG CCGCCGGCCT GGCGATGGCG GGCGCGAACT GCGCCGCGAT GTGGCACGAC
GCCCGGCTGG CCCGGCAGGC GCCACGCCGC GCATGA
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| Protein sequence | MQSSSPSSPA SGALHAQAPA GLSTPVLLLM ATACGLCAGA NYFNQPLLHS IAVQLGVSES
RAAFTVTISQ VSYAAGLLLL VPLGDKLERR RLVVALMALA ACGLFLSGFA GSFGALAAGT
LITGLFSVAA QVLVPMAAAL ASPGRSGRAV GLVMSGLLVG ILAARSVAGL LSGVGGWSLV
YRAGGVAMLA VALALWFVLP ALRTPHPPSY AQVLRSLATL ARQHPRLRSR ALLGGLSFGS
VSVLFSTMAL MLAGPSHQLG DAQIGLVGLA GVAGALMANW AGRMADRGHE QGTTRASVLL
VLASWGALWL GGTSLPWFLA GVLAIDLALQ GVHISNQNVI YALAPQARSR LNAVYMTTYF
AGAALGSALG SAAWQHGGWD ATCAAGLAMA GANCAAMWHD ARLARQAPRR A
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