| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2255 |
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| Symbol | |
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| ID | 4665519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2481139 |
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| End bp | 2482107 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823460 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_970607 |
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| Protein GI | 120610929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0934462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000332444 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAAAC TGACCCGACG CACGCTGGCC ACGGCCCTGG CCTGCGCGCC CGTGGCCGCC
CTGCTGCCCG CGGCCGCGTG GGCGCAAAAG CCCATCGTGC TGGGCTTCAG CCAGGTCGGC
GCGGAGAGCG AGTGGCGCAC CGCGAACACC GAATCGATCA AGTCGGCGGC CAGGGACGCC
GGGATCGAGC TGAAGTTCTC CGACGCGCAG CAGAAGCAGG AGAACCAGAT CAAGGCCATC
CGCTCCTTCA TCGCCCAGCG CGTGGACGTG ATCGCGTTCT CGCCCGTCGT GGAATCGGGC
TGGGAGCCGG TGCTGCGCGA GGCCAAGGCC GCGAAGATCC CCGTGGTGCT CACCGACCGC
GCCGTCAACA CCAAGGACAC GTCGCTCTAC GTCACCTTCA TGGGCTCTGA CTTCGTGGAA
GAAGGCCGCA AGGCCGGCCG CTGGCTGGTC GAGAAGATGA AGGACGCCAA GGGCGACGTG
AACATCGTCG AGCTGCAGGG CACCGTGGGC TCGGCCCCGG CCATCGACCG CAAGAAGGGC
TTCGAGGAAG TCGTGAAGGC CGACCCGAAG TTCAAGATCA TCCGCTCGCA GACCGGCGAC
TTCACCCGCG CCAAGGGCAA GGAAGTGATG GAAGCCTTCC TGAAGGCCGA GGGCAGGAAG
ATCAACGTGC TCTACGCGCA CAACGACGAC ATGGCCATCG GCGCGATCCA GGCCATCGAG
GAGGCCGGCC TCAAGCCCGG CAAGGACATC ACCATCATCT CCATCGATGC CGTCAAGGGC
GCGTTCGAGG CCATGATGGC CGGCAAGCTC AACGTGACCG TGGAATGCAG CCCCCTGCTG
GGCCCGCAGC TGATGGCGGC CGTCAAGGAC ATCAAGGCCG GCAAGACGGT GCCCAAGCGC
ATCGTGACGG AAGAAGGCAT CTTCCCGATG GAGACCGCGG CCCAGGAATT CCCCAAGCGC
AAGTACTGA
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| Protein sequence | MTKLTRRTLA TALACAPVAA LLPAAAWAQK PIVLGFSQVG AESEWRTANT ESIKSAARDA
GIELKFSDAQ QKQENQIKAI RSFIAQRVDV IAFSPVVESG WEPVLREAKA AKIPVVLTDR
AVNTKDTSLY VTFMGSDFVE EGRKAGRWLV EKMKDAKGDV NIVELQGTVG SAPAIDRKKG
FEEVVKADPK FKIIRSQTGD FTRAKGKEVM EAFLKAEGRK INVLYAHNDD MAIGAIQAIE
EAGLKPGKDI TIISIDAVKG AFEAMMAGKL NVTVECSPLL GPQLMAAVKD IKAGKTVPKR
IVTEEGIFPM ETAAQEFPKR KY
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