Gene Aave_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2203 
Symbol 
ID4668226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2423721 
End bp2424086 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID639823408 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_970555 
Protein GI120610877 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.929187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGA ACTATGGTTC CAAGCGCACC GTCGTCGGTG CCCACTACGG CACGCGCGAC 
TGGATCAGCC AGCGCGTCAC CGCGGCCCTG ATGGCCGTCT TCACCCTCGT CGTGCTGGCG
CAGCTGGTGC TCACCAAGGG CCCCATCGGC TACGACCGCT GGGCCGGCAT CTTCGCCGCG
CAGTGGATGA AGGTCCTCAC CTTCTCCGTC ATCGTCGGCC TGGCATGGCA TGCCTGGGTG
GGCATGCGCG ACGTCTGGAT GGACTACGTC AAGCCCGTCG GCCTGCGCCT GGCGCTGCAA
GCGGTCACGA TCTTCTGGCT CGTCGGCTGC GCCGGCTGGG GCATCCAGAT CCTCTGGCGC
CTCTGA
 
Protein sequence
MSVNYGSKRT VVGAHYGTRD WISQRVTAAL MAVFTLVVLA QLVLTKGPIG YDRWAGIFAA 
QWMKVLTFSV IVGLAWHAWV GMRDVWMDYV KPVGLRLALQ AVTIFWLVGC AGWGIQILWR
L