Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2171 |
Symbol | |
ID | 4669175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2387155 |
End bp | 2388108 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823376 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_970523 |
Protein GI | 120610845 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00656202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCC TGCCGCCCGT TTTCCAGAAA CTTTCGCTGC CGGTCATCGG CTCGCCGCTG TTCATCATCA GCAATCCGAA GCTGGTGATC GCGCAGTGCC AGGCCGGCAT CGTCGGCTCC ATGCCGGCGC TCAACGCCCG GCCTGCCGAA CTGCTGGACG AATGGCTCGC CGAGATCACC GAAGCGCTCG CGGCCTGGGA CCGCGCCCAT CCGGAATCGC CCGCCGCACC GTTCGCCATC AACCAGATCG TGCACAAGAG CAACGACCGG CTGGAGCACG ACATGGAGGT CTGCGCCAAG TACAAGGTGC CGATCGTCAT CACGTCCCTG GGCGCGCGCG AGGACGTGAA CCAGGCCGTG CACGGCTGGG GCGGCGTGGT GCTGCACGAC ATCATCAACA ACAAGTTCGC CCACAAGGCC ATCGAGAAGG GTGCCGACGG CCTGATCGCC GTGGCGGCGG GCGCGGGCGG CCACGCGGGC ATCAAGAGCC CGTTCGCGCT CATCCAGGAA ATCCGCCAGT GGTTCGAGGG GCCGCTGGCG CTCTCGGGCT CGATCGCCTC CGGCGGCGCC ATCCTGGCCG CGCAGGCCAT GGGCGCCGAC TTCGCCTATA TCGGCTCGGC GTTCATCGCC ACGCACGAGG CGCGCGCGCA GGAGGCCTAC AAGCAGGCCA TCGTGGATGG CAACTCCGAC GACATCGTCT ACAGCAACCT CTTCACGGGC GTGCATGGCA ACTACCTCGC GCCTTCCATC CGTGCCGCAG GACTCGATCC GGACCACCTG CCCGAATCGG ATCCCAGCAA GATGAACTTC GGTGGCGATG CGAAGAAGGC CTGGAAGGAC ATCTGGGGCT GCGGGCAGGG CATCGGCGCG ATCACCGAAG TGACGGGCGC GGCCGAGCTG GTCGGGCGCC TGCGCCGGGA ATACACTGCG GCCCGCGAAC GCCTGGCGCT CTGA
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Protein sequence | MRTLPPVFQK LSLPVIGSPL FIISNPKLVI AQCQAGIVGS MPALNARPAE LLDEWLAEIT EALAAWDRAH PESPAAPFAI NQIVHKSNDR LEHDMEVCAK YKVPIVITSL GAREDVNQAV HGWGGVVLHD IINNKFAHKA IEKGADGLIA VAAGAGGHAG IKSPFALIQE IRQWFEGPLA LSGSIASGGA ILAAQAMGAD FAYIGSAFIA THEARAQEAY KQAIVDGNSD DIVYSNLFTG VHGNYLAPSI RAAGLDPDHL PESDPSKMNF GGDAKKAWKD IWGCGQGIGA ITEVTGAAEL VGRLRREYTA ARERLAL
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