Gene Aave_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2145 
Symbol 
ID4668194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2356123 
End bp2356935 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID639823351 
Productnitrate ABC transporter, ATPase subunits C and D 
Protein accessionYP_970498 
Protein GI120610820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.821983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCT CCCTCAACAC CAAGTTCATC GAAATCCAGG GCGTGGAGCA GACCTTCAAG 
ACCACCAAGG GCGTGTTCCC CGCGCTGCGC GGCATCGACC TGGCGATCGC CAAGGGCGAG
TTCGTCTCGC TTATCGGGCA CTCGGGCTGC GGCAAATCCA CCCTGCTCAA CCTGATCGCG
GGCCTGGCCA CGCCCACGGC CGGCGCGCTG ATCTGCGCCA ACAAGGAAAT CAAGGGCCCC
GGCCCGGACC GCGCGGTCGT CTTCCAGAAC CACTCCCTGC TGCCCTGGCT GACCTGCGAA
GGCAACGTGT ACCTGGCCGT GGAGCGCGTG TTCGGCGCCA CCGAATCGAA AACGCGCCTG
AAGGAGCGCA CCGCCGCCGC CCTGGCGCTG GTGGGCCTCG CCCATGCCGC GCACAAGCGC
CCCGGCGAAA TCTCCGGCGG CATGAAGCAG CGCGTGGGCA TCGCCCGGGC GCTATCGATG
GAGCCGCAGG TGCTGCTGAT GGACGAACCC TTCGGCGCCC TGGACGCCCT CACCCGCGCC
AAGCTGCAGG ACGAGCTGCT GGAGATCGTG GCGCGCACGC AGAGCACCGT GGTGATGGTG
ACCCACGACG TGGACGAGGC CGTGCTGCTC TCCGACAAGA TCGTGATGCT GACCAACGGG
CCGGCGGCGA CCATCGGCGA GGTGCTGGCA GTGGAGATTC CGCGGCCGCG CAGTCGCGTG
CAGCTGGCGG AGGATGCCGT GTACCTGCAG TGCCGGAAGG CGGTGATCGA TTTTCTGTAC
ACGCGGCAGG GGCATGTGGA GAAGGTGGCT TGA
 
Protein sequence
MHASLNTKFI EIQGVEQTFK TTKGVFPALR GIDLAIAKGE FVSLIGHSGC GKSTLLNLIA 
GLATPTAGAL ICANKEIKGP GPDRAVVFQN HSLLPWLTCE GNVYLAVERV FGATESKTRL
KERTAAALAL VGLAHAAHKR PGEISGGMKQ RVGIARALSM EPQVLLMDEP FGALDALTRA
KLQDELLEIV ARTQSTVVMV THDVDEAVLL SDKIVMLTNG PAATIGEVLA VEIPRPRSRV
QLAEDAVYLQ CRKAVIDFLY TRQGHVEKVA