Gene Aave_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2141 
Symbol 
ID4667607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2353905 
End bp2354255 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content63% 
IMG OID639823347 
ProductRNP-1-like RNA-binding protein 
Protein accessionYP_970494 
Protein GI120610816 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.253985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.55091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGCA AAATCTATGT GGGCAACCTG CCCTATTCCG TGACCGATGA AAGCCTGCGC 
AGCAATTTCG CGGAATTCGG CGGCGTCACT TCGTCCAAGA TCATGACGGA CCGCGAAACC
GGTCGCTCCA AGGGTTTCGG TTTCGTGGAA ATGTCCTCGG CCGAAGACGC GCAGTCGGCG
ATCACCGGCC TGAACGGCCT GTCCGTCGAT GGACGCTCCA TCGTCGTCAA CCTGGCCCGC
CCGCGTGAGG CAAACGGCGG CCCGGGTGGC TACAGCCCGG TGGGCTACGC GGTGAACAAG
CGCTCCGACG TGGGCTATGG CAATGACGGC TACGGCGGCG GCCGTTACTG A
 
Protein sequence
MSCKIYVGNL PYSVTDESLR SNFAEFGGVT SSKIMTDRET GRSKGFGFVE MSSAEDAQSA 
ITGLNGLSVD GRSIVVNLAR PREANGGPGG YSPVGYAVNK RSDVGYGNDG YGGGRY