| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2111 |
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| Symbol | |
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| ID | 4665765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2317457 |
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| End bp | 2320666 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639823319 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_970466 |
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| Protein GI | 120610788 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0570882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT TCTTCATCCA CCGGCCCATC TTCGCGTGGG TCATCGCCAT CGTCATCATG
CTCGCGGGCG CGATGTCGAT CCGCAATCTG CCGCTGGAGC AGTACCCCGA CATCGCGCCG
CCGCGCGTAT CCATCAGCGC CATCTACACC GGCGCATCGG CCAAGACGGT GGAGGAATCG
GTCACGCAGG TGATCGAGCA GCAGCTCAAG GGGCTGGACA ACCTCATCTA CATGGGCTCG
ACCAGCGACG CCTCGGGCAG CTCGCGCACC ACGCTCACCT TCAACGCCGG CACCAACATC
GACGTGGCGC AGGTGCAGGT GCAGAACAAG CTGCAGCAGG CCATGTCGCG CCTGCCGCCG
GCGGTGCAGA GCCGCGGCGT GACGGTCACC AAGGGCGGCA ACGATTACCT GATGATCGTC
AGCTTCACCT CGCCCGACCC GTCGGTCACG CAGGTGGACA TCGGCGACTA CATCTCCAGC
AACCTCGTGG ACGTCATCAG CCGCGTCGAT GGCGTGGGCG ACGTGGCGAC CTTCGGCACG
CCCTACGCGA TGCGCGTGTG GATGGATCCC GCCAAGCTCG AAAAGTACGC GCTGATGCCC
TCCGACGTGG GCAGCGCCAT CAACGCGCAG AACGCGCAGG TTTCGGCGGG GCAGCTCGGC
GCCCTGCCCG CCGTGGGCGG CCAGCAGCTC AACGCCACCA TCACCGCGCG CAGCAAGCTG
CAGAGCCGGG CCGAGTTCGA GAACATCGTG CTCAAGGTGG CCACCGACGG CTCGGTGGTG
CGCCTGAAGG ACGTCGCGCG CATCGAACTC GGCGCGGAGA ACCTCACCAT CACCTCGCGG
CTCAACGGGC GGCCGGGCGC GGGCATGGGC GTGGTGCTGG CCGACGGCGC CAACGCCATG
GCGGTGGCCG AGGCGGTGAA CGCCAAGATC GCAGAGCTGC GGCCCTTCTT CCCCTACCAG
CTCAAGCCGT TCACGAGCTA CGACACCACG CCGTTCGTCG AGGCGTCCAT CGACGAGGTG
GTCAAGGCGC TGGCCGAGGC CATGGTGCTC GTGGTGCTGG TGATGTATCT CTTCCTGCAG
AACTTCCGCG CCACACTGAT CCCGGCCATC GCCGTGCCGG TGGTGCTGCT GGGCACCTTC
GGGGTGCTCT CGGCGGCGGG CTATTCGATC AACACGCTCA CGATGTTCGG CATGGTGCTG
GCGATCGGCC TGCTGGTGGA CGACGCGATC GTGGTGGTGG AGAACGTCGA GCGCGTGATG
AGCGAGGAAG GGCTTACGCC GAAGGAGGCC ACCCGCAAGT CGATGGCGGA GATCACGCCG
GCCCTGGTGG GCATCGCGCT CACGCTCTCG GCGGTGTTCA TCCCGATGGC ATTCTTCGGC
GGCTCGACGG GCGTGATCTA CCGGCAGTTC TCGATCACCG TGGTTTCGGC GATGGTGCTG
TCGGTGCTGG TGGCCCTCAC GCTCACGCCG GCGCTCTGCG CCACGCTGCT CAAGCCCATC
CCGAAGGGCG CGCACAGCCC GCACGGCGGC GTGCCGCGGC GCGGCCCGCT GGGCTGGCTG
GACCGCTTTT TCGCCGGCTT CAACCGCCGC TTCGACCGCA CGGCCGACGG CTACCAGCGC
GGCGTGGGCC GCATCGTGCG CCGTGGCGGC CGCATGATGC TGATCTACGC GCTCATCGTG
GGCGGCATGG CGGTGCTGTT CATGCGCCTG CCCACTTCCT TCCTGCCCAA CGAGGACCAG
GGGGCCATGC AGGTGCAGAT CACCCTGCCC GCGGGCTCGT CCAATACCCG GCTGCAGGCG
GTGATGGCCG AGGTGCAGAA ATACTTCGCC GAGCAGCCCG ACGTGGTGAG CTTCAACTCC
ATCACCGGGG CCAACGGCGA CCAGAGTTCC GCGCGCGGAT TCGTGCGCCT GAAGACCTGG
AGCGAACGCC AGGGCCCCGG GCAGAGCGCC GACGCGATCG CGCGCAAGGC GACCCGCGAC
CTGCGCCGGA TCCGCGACGC GCGCATCTTC GTCGTGCTGC CGCCGGCCGT GCGCGGGCTG
GGCGCCAACG CGGGCTTCAA CTTCCAGCTC AAGGACCTGA ACGGGCTGGG CCACGCGGCG
CTCGTGGCCG CGCGCGACCA GGTGCTGAAG CTCGCCTCCG GGCGGCCCGA GCTCTCCAAC
GTGCGCAGCA ACAACCCCGA CGACACCGCC CAGCTGGGCG TGTCCATCGA CGACGCCAAG
GCCGGCGCGC TGGGCCTGGC CACCGCCGAC ATCAACAGCA CGCTCTCGAG CGCCATCGGC
GGCACTTACG TGAACGATTT CCTCAACAAG GGCCGCGTCA AGCGCGTGTA CATGCAGGGC
GACGCGCCCT ACCGCATGCT GCCGCAGGAC ATCGGCCCCT GGACGGTGCG CAACAACCAG
GGCCAGATGG TGCCGTTCAG CGCGTTCTCT TCCACGAACT GGACCTACGG CTCCCCGCAG
CTGCAGCGCT ACAACGGCAG CCCGAGCTAC GAGTTCGTGG GCGACGCGGC GCCGGGCGTC
AGCTCCGGCG CGGCCATGGC GGCGGTGGAC GAGATCATGA AGCAGATGCC TCCGGGCATC
GGCTACGAAT GGACCGGCGC CTCCTACCAG GAACGGCTCT CGGGCTCGCA GGCGCCGCTG
CTCTACGCGA TCTCCATCCT GTTCGTATTC CTGTGCCTGG CCGCGCTGTA CGAGAGCTGG
TCGGTGCCGT TCTCGGTGAT CCTGGTGGTG CCGCTGGGCA TCGTGGGTGC GCTGCTGGGC
ATCGGCATCC GAGGACTGTC GAACGACGTG TACTTCCAGG TGGGGCTGCT GACCACCGTG
GGGCTGGCAT CGAAGAACGC CATCCTGATC GTGGAATTCG CCACCCAGCT GCAGGCCGCC
GGGCGCAGCG TGATCGACGC CACGCTCGAG GCCGTGCGGC TGCGGCTGCG GCCCATCCTG
ATGACCTCGC TGGCCTTCGG CTTCGGCGTG CTGCCGCTGG CGATCGGCAC CGGCGCGGGC
GCGGGCGGGC GCCAGGCGAT CGGCACCGCG GTGCTGGGCG GCATGGTGTC GGCCACGGTG
CTGGGCATCT TCTTCGTGCC GGTGTTCTTC GTGCTGATCC GCGGCTTCTT CGCCCGGCGC
GGGGCGCGTA CCGGGCCCGA CGCGGCGCAC CCGTCGGCGG GCATCGACGC CCCCCCGCCT
TCCAGCCCTG CCCCCGGAGC CTCCGCATGA
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| Protein sequence | MAQFFIHRPI FAWVIAIVIM LAGAMSIRNL PLEQYPDIAP PRVSISAIYT GASAKTVEES
VTQVIEQQLK GLDNLIYMGS TSDASGSSRT TLTFNAGTNI DVAQVQVQNK LQQAMSRLPP
AVQSRGVTVT KGGNDYLMIV SFTSPDPSVT QVDIGDYISS NLVDVISRVD GVGDVATFGT
PYAMRVWMDP AKLEKYALMP SDVGSAINAQ NAQVSAGQLG ALPAVGGQQL NATITARSKL
QSRAEFENIV LKVATDGSVV RLKDVARIEL GAENLTITSR LNGRPGAGMG VVLADGANAM
AVAEAVNAKI AELRPFFPYQ LKPFTSYDTT PFVEASIDEV VKALAEAMVL VVLVMYLFLQ
NFRATLIPAI AVPVVLLGTF GVLSAAGYSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
SEEGLTPKEA TRKSMAEITP ALVGIALTLS AVFIPMAFFG GSTGVIYRQF SITVVSAMVL
SVLVALTLTP ALCATLLKPI PKGAHSPHGG VPRRGPLGWL DRFFAGFNRR FDRTADGYQR
GVGRIVRRGG RMMLIYALIV GGMAVLFMRL PTSFLPNEDQ GAMQVQITLP AGSSNTRLQA
VMAEVQKYFA EQPDVVSFNS ITGANGDQSS ARGFVRLKTW SERQGPGQSA DAIARKATRD
LRRIRDARIF VVLPPAVRGL GANAGFNFQL KDLNGLGHAA LVAARDQVLK LASGRPELSN
VRSNNPDDTA QLGVSIDDAK AGALGLATAD INSTLSSAIG GTYVNDFLNK GRVKRVYMQG
DAPYRMLPQD IGPWTVRNNQ GQMVPFSAFS STNWTYGSPQ LQRYNGSPSY EFVGDAAPGV
SSGAAMAAVD EIMKQMPPGI GYEWTGASYQ ERLSGSQAPL LYAISILFVF LCLAALYESW
SVPFSVILVV PLGIVGALLG IGIRGLSNDV YFQVGLLTTV GLASKNAILI VEFATQLQAA
GRSVIDATLE AVRLRLRPIL MTSLAFGFGV LPLAIGTGAG AGGRQAIGTA VLGGMVSATV
LGIFFVPVFF VLIRGFFARR GARTGPDAAH PSAGIDAPPP SSPAPGASA
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