Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2101 |
Symbol | |
ID | 4668535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2302576 |
End bp | 2303082 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639823309 |
Product | thioesterase superfamily protein |
Protein accession | YP_970456 |
Protein GI | 120610778 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0616916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.421094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGC CCCACAGTCC AGCCCACCAG CTCAGCATGA CGGTGCTCAT GTCGCCCGAC ATGGCCAATT TCTCCGGCAA TGTGCATGGG GGCGCGGTCC TCAAGCTGCT GGACCAGGTC GCCTACTCCT GCGCGGCCCG CTATTCGGGC AGTTACGTGG TCACGCTGAG CGTGGACCAG GTGACCTTCC TGCAGCCGAT TCACGTGGGC GAGCTGGTCA CCTTCCTGGC GAGCGTGAAC TACACCGGCA CCTCGTCGAT GGAGATCGGC ATCAAGGTGG TGGCCGAGGA GATCCGCACC CAGATCGTGC GGCACGTGAA CAGTTGCTTC TTCACGATGG TGGCTGTGGA CGAGGCCCGC AAGCCCACGC CGGTGCCGCC GTTGTCGCCC TCCACGGCGG ACGAGCGGCG GCGCTGGGAG GCGGCGCTGC TGCGCAAGAG CCTGCGCAAG GAGCAGGCGG AGCGTTTCGC TCAGATCCAG CGCGAGGCGG CGCTGGTGCA CGGCTGA
|
Protein sequence | MTMPHSPAHQ LSMTVLMSPD MANFSGNVHG GAVLKLLDQV AYSCAARYSG SYVVTLSVDQ VTFLQPIHVG ELVTFLASVN YTGTSSMEIG IKVVAEEIRT QIVRHVNSCF FTMVAVDEAR KPTPVPPLSP STADERRRWE AALLRKSLRK EQAERFAQIQ REAALVHG
|
| |