| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2088 |
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| Symbol | |
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| ID | 4667143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2291986 |
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| End bp | 2293014 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639823297 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_970444 |
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| Protein GI | 120610766 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.320314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGA AGGCCGGCAC GCCAAAGCGC TGGCCGCCCG CATGCCGCCG ATTCTTCGGC
AAACCGCATC GCAATACAAT CCGCCACCCG TGGTTCCATT GTTCACATAT CGTGCATAAA
ACGCCCGCCA CCGACGACCT GCGTGTTTTC ACCGCGGTGG TCCGCAAGGC CAGCTTCGCC
GGGGCGGCCG CCGAACTGGG CGCCTCGCCT GCCTACGTGA GCAAGCGCAT CCGCCTGCTC
GAGGAAGAGC TGGCCGTGAA GCTGCTGCAC CGCACGACGC GCCGGGTGGC GGTGACGGAG
GAGGGTGAGC GCGTCTTCCA CTGGGCGCAG CGCATCCTGG ACGATTGGGA CCAGTTGCTG
CAGGAGGTGG CCGTGACGCG GCGCGAGCCG CGCGGGTTGC TCCGGGTGAG CTGCAGTTTC
GGTTTCGGCC GGCGCATCGT GGCGCCCGCG GTGTCGCGGC TGGTGGAGCG CCACCCGGGC
CTGCAGGTGC GGCTCGAAGT GTTCGACCGG CTGGTGGACG TGGCGGGGGA GGGGTTCGAC
CTGGACATCC GCGTGGGCGA CGAGATCGCG CCGCACCTGA TCGCACGCCG CCTGGCGGGC
AACCACCGCG TGCTGTGCGC GGCGCCCGGC TACCTGGCGC GCAAGGGCAC GCCCCGGGCG
GTGGACGACC TGGCCGGCCA CGACTGCCTG GTGATCAAGG AGCGTGACCA TCCCTTCGGC
GTCTGGCGGC TGCGCAGCGG CGCGGCGGAC CGGACGGTGA AGGTGCGCGG GTCGCTGTCG
GCCAACCATG GCGAAATGGC CGTGCAGTGG GCCGTGGATG GGCGCGGCAT CGTGCTGCGC
TCCCTGTGGG ATGTCGGGCC CGACCTGGCC ACCGGCCGGC TGGTGCGCGT GCTGCCCGAA
TGGCAGCAGG AAGCCAACGT CTGGGCCGTG TATCCCACGC GGCTGGAGCG CTCGGCCAAG
GTGCGCGTGT GCGTCGAATT CCTGCAGGCC CATTTCTCGC GGGAAACGTG GGGGAGCGAG
GCCGCATGA
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| Protein sequence | MDGKAGTPKR WPPACRRFFG KPHRNTIRHP WFHCSHIVHK TPATDDLRVF TAVVRKASFA
GAAAELGASP AYVSKRIRLL EEELAVKLLH RTTRRVAVTE EGERVFHWAQ RILDDWDQLL
QEVAVTRREP RGLLRVSCSF GFGRRIVAPA VSRLVERHPG LQVRLEVFDR LVDVAGEGFD
LDIRVGDEIA PHLIARRLAG NHRVLCAAPG YLARKGTPRA VDDLAGHDCL VIKERDHPFG
VWRLRSGAAD RTVKVRGSLS ANHGEMAVQW AVDGRGIVLR SLWDVGPDLA TGRLVRVLPE
WQQEANVWAV YPTRLERSAK VRVCVEFLQA HFSRETWGSE AA
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