| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2043 |
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| Symbol | |
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| ID | 4669233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2229741 |
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| End bp | 2231069 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639823253 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_970400 |
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| Protein GI | 120610722 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0787924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCCGA ACGAATTGCC GTTGGATGGC ACGCTGTCCG CCGTCGGGAC GCCCCCCGGG
CTGCCGGATT CCGACATGTT GCAGATACTC ACGCGCAACG TGGGCGCCAC GGTGGCCGTG
GTCAGCCGCG CGCTGCGCGT CGTTTACGTG AACGACGAAT ACGCGCGCTG GTTCCGGGCC
GCGCCCGAGG CCATCGTCGG CAAGAGCCTG ATCGAGCTCT ATGGCGAATA CAACTATTCG
CGCTTCATGC CTTACGTGCA GCGTGTGCTG GCCGGAGAGC GGGTGAGCTA CCAGCGGCTG
GTACTCGATC CGGAGGGGCG CGAATCCTGG CGCACCATCT GCGTATCGCC CTGGCGGGAC
GCGGGCGGCG GCATCGCCGG CTTCGTCACG GCCGCACTGG ACGTGGACGA ACTCCAGGTG
GCCATGAACG CGCTGCGCGC CGCCAACCAG CGCCTGTCCT CGCACATGGA CAACAGTCCG
CTCGCCGTGC TGGAAATGGA CGACCAATTG CGCGTGCTGC GTTGCTCGCG CCGCGCCATC
GAACTCATGG GCTGGCAGGA TCTCGTCCAG GTCGAATGCC GCCGCCTGCA CGAGCTGCCC
GGCACCTCGG CCATGGAGCA GCACCTGTCG CAGGCCTTCT CGGACCTGCG TTCGGGCCGC
ACCACGCGCA ACCGGGTGGA GTCCTGCCTG CGCCGGGCCG ATGGATCGGA AGTGCATTGC
GAGTGGTTCA GCTCCGCGCT GACCGACGAA GGCGGCCGCG TCACGTCGAT CATGTCGCTC
GTGCAGGACA TTTCCGCGAA GATCGAGATC GCGCGCCAGC AGCATTACCT CGCCAACCAC
GACTCGCTCA CCGGCCTGCA GAACCGATCG GCCTTCCAGA GCCGCTTCGA GCATTCCCTC
GCCCGGGTGC GCTCGCGAGG AGGCGCGGTG GCGCTGCTGT TCATCGACCT GGACGGCTTC
AAGAAAATCA ACGATGGGCA CGGCCACAAG GTGGGCGACG AGGTGCTGCG CTGCGTGGCG
CGCCGGCTGG CGCATGCCGT GCGCGGCAGC GACACCGTGG CGCGTCTGGG CGGCGACGAG
TTCCTCGTGA TGCTCGACAC CGGGGTGGAG GCGGATCTGG TCGGCCACAT CGGGGCGCGC
ATCATCTCCG CGCTGGCCGA ACCCATGGAA GTGGACGGTC ATGCCGTGCG CGTGGGCGCG
AGCATCGGTG TGGCCATGCA CCCCCCGCTG GAGGGCGACA TCGAATTGCT CATGACCCAG
GCCGACCAGG CCATGTACGC CGCCAAGCGT ACCGGCCGCG GCTGCATGCG CTACGCGGGC
CAGGGCTGA
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| Protein sequence | MTPNELPLDG TLSAVGTPPG LPDSDMLQIL TRNVGATVAV VSRALRVVYV NDEYARWFRA
APEAIVGKSL IELYGEYNYS RFMPYVQRVL AGERVSYQRL VLDPEGRESW RTICVSPWRD
AGGGIAGFVT AALDVDELQV AMNALRAANQ RLSSHMDNSP LAVLEMDDQL RVLRCSRRAI
ELMGWQDLVQ VECRRLHELP GTSAMEQHLS QAFSDLRSGR TTRNRVESCL RRADGSEVHC
EWFSSALTDE GGRVTSIMSL VQDISAKIEI ARQQHYLANH DSLTGLQNRS AFQSRFEHSL
ARVRSRGGAV ALLFIDLDGF KKINDGHGHK VGDEVLRCVA RRLAHAVRGS DTVARLGGDE
FLVMLDTGVE ADLVGHIGAR IISALAEPME VDGHAVRVGA SIGVAMHPPL EGDIELLMTQ
ADQAMYAAKR TGRGCMRYAG QG
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