| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2025 |
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| Symbol | |
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| ID | 4666406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2207044 |
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| End bp | 2208645 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823236 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_970383 |
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| Protein GI | 120610705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAC CATCCGCCTC CCCTCCGCCT CCAGGGCACA CCTCCCTCAT CGCACGCGCC
AGGAGCGCGG CGCTCGGCAA CCTGCAGCTC ACGGTCTCGG CCGGGATGAT CGCCGTGGTG
GTGCTCTGGG GACTGGTGTC TCCCGCCAGC CTCGGTACGT TCTTCGGCAC GCTGCTGTCG
GACATCACGC GGAATTTCGG GTGGCTGTAC CTGTGGGTGG TGCTGGGGCT GGTCGGGCTG
GCCCTGTTCC TGGCCCTGAG CCGCTACGGC GACCTGAAGC TGGGCGACGA GGACGAGGAA
CCCGAGTTCT CCGCCGCGAC ATGGTTCGCG ATGCTCTTCG CGGCGGGCAT GGGCATCGGC
CTGGTGTTCT GGGGCGTGGC CGAGCCGATC TCGCACTACG GGCTGCCGCC GCCCGGCATC
GTCCCGCAGA CGCCCGAGGC CGCGGGCGCC GCCATGCGCT ACGCCTTCTT CCACTGGGGC
CTGCATCCCT GGGCGATCTA CGGCATCGTC GGGCTGACGA TCGCCTTCTT CCAGTTCCGC
CGGCAGGCCC CGGCCCTGGT CAGTTCCGCG ACCGAGTCGC TGCCCTGGCG CGGCATGCGC
CACCTCTCGC CGCTGGTGAA CGTGCTGGCG GTGGTGGCCA CGGCCTTCGG GGTCGCCGCC
TCGCTCGGCA TGGGCGCCGC GCAGATCAAC GGCGGGCTGC AGGCGGTGTT CGGCGTGCCG
GTGGGTCCCT GGTCGCAGGC CGTGATCATC GTGGTGACGA CGGCGCTGTT CATCACCTCG
GCGGTGAGCG GCGTGGAGCG GGGCGTCAAA TGGCTCTCCA GCGCCAATCT GATGCTCGCC
GCCCTGCTGG CGCTGGCGGT GTTCCTGCTC GGGCCCACGG TGTCGCTGGT GAACACCTTC
ACCAACACGC TGGGCGCCTA CCTGAGCGAA TTCGTGCGCA CCAGCCTGCG CATGTCGCCC
TTCCGGGACA GCAGTTGGGT GGGCGACTGG ACCATCTTCT ATTGGTCGTG GTGGATCGCC
TGGTCGCCGT TCGTGGGCCT GTTCATCGCG CGCGTGTCGC GCGGGCGCAC GATCCGCGAG
TTCGTGCTGG GCACGGTGAT CGCGCCCACG CTGGTGGGCT TCCTGTGGTT CTCGATCTTC
GGCGGCACCG CGCTGCACCT GGAGATCTTC CGGCAGGTCC CCCTGGCCGC GGCCGCGCAG
GCCGACCCGG CCACCGCGAT GTTCGCCATG TTCGGCGCCA TGCCGATGGG GCTGGCGATG
TCCGTCGTGG CCACGATGCT GGTGATCGTG TTCTTCATCA CTTCGGGCGA TTCGGCCACC
CTGGTGCTCA GCACGATGAG CACGCGCGGC GACCCCAATC CGTCCGCGCG CGTGAAGATC
GTCTGGGGCC TGCTGGTGGC CGGCATCGCG CTGTCGCTGC TCTTCGCGGG GGGCCTGCAG
GCGGTGCAGA CCGCCACCAT CGTCTTCGCG CTGCCGTTCG CGCTGGTGCT GCTGCTGATG
GCGGTGGCCC TGATGCGGGC GGTGCGCGAG GACCACGAGG CCGAACGCAG ACGCGAACGC
GCCCTGCGGC GCCGGATGCG CGAAATGGCG ATGCGCGAGT GA
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| Protein sequence | MQAPSASPPP PGHTSLIARA RSAALGNLQL TVSAGMIAVV VLWGLVSPAS LGTFFGTLLS
DITRNFGWLY LWVVLGLVGL ALFLALSRYG DLKLGDEDEE PEFSAATWFA MLFAAGMGIG
LVFWGVAEPI SHYGLPPPGI VPQTPEAAGA AMRYAFFHWG LHPWAIYGIV GLTIAFFQFR
RQAPALVSSA TESLPWRGMR HLSPLVNVLA VVATAFGVAA SLGMGAAQIN GGLQAVFGVP
VGPWSQAVII VVTTALFITS AVSGVERGVK WLSSANLMLA ALLALAVFLL GPTVSLVNTF
TNTLGAYLSE FVRTSLRMSP FRDSSWVGDW TIFYWSWWIA WSPFVGLFIA RVSRGRTIRE
FVLGTVIAPT LVGFLWFSIF GGTALHLEIF RQVPLAAAAQ ADPATAMFAM FGAMPMGLAM
SVVATMLVIV FFITSGDSAT LVLSTMSTRG DPNPSARVKI VWGLLVAGIA LSLLFAGGLQ
AVQTATIVFA LPFALVLLLM AVALMRAVRE DHEAERRRER ALRRRMREMA MRE
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