Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1968 |
Symbol | |
ID | 4669326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2137749 |
End bp | 2138342 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823178 |
Product | isochorismatase hydrolase |
Protein accession | YP_970326 |
Protein GI | 120610648 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.357759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0178408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCCT GTCTGTTAGT GATCGACGTG CAGGAGTCGT TCCGCCACCG CCCCTTTTTC TCGGAAGACG GCCTGCCCGC CTACCTCGCG GCGCAGAACG CGCTCATCGA GGGCTGCGAG GCGCGCGGCA TTCCGGTCGT GCGGATACTG CACAGCGATG GTCCCGAAGA GGCATCGAAC CCCTTCGCGC CTGCATCCGG GCATGTACGC CCCCTGGCCG GGCTGGCCGG GTCCGCGCCC GCGGCGGAAT TCACCAAGCA CCGCCACAGC GCGCTGGTGG GCACCGGCCT GGACGTCTGG CTCACGCGCC AGGGTATCGG CCGGCTGATC GTGAGCGGCA TCCGCACCGA ACAGTGCTGC GAGACCACCA CGCGCCACGC CAGCGACCTG GGCTGGGAAG TGGACTATGT GGGCGAGGCC ACGCTGACCT GGGACATGCG CCAGCCCGAC GGCCGGGTGC TGACGGCGGC GGACATCCTG GCCCGTACGG AGACCGTGCT CGCAGGCCGC TTCGCCACCC TGTGCACGGT GGCCCAGGCG CTGTCCCGCG CGGGGGCAGG CACTGAAGCG GCCCTTGCCG GAGAGGCGGC ATGA
|
Protein sequence | MKACLLVIDV QESFRHRPFF SEDGLPAYLA AQNALIEGCE ARGIPVVRIL HSDGPEEASN PFAPASGHVR PLAGLAGSAP AAEFTKHRHS ALVGTGLDVW LTRQGIGRLI VSGIRTEQCC ETTTRHASDL GWEVDYVGEA TLTWDMRQPD GRVLTAADIL ARTETVLAGR FATLCTVAQA LSRAGAGTEA ALAGEAA
|
| |