Gene Aave_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1968 
Symbol 
ID4669326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2137749 
End bp2138342 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content70% 
IMG OID639823178 
Productisochorismatase hydrolase 
Protein accessionYP_970326 
Protein GI120610648 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.357759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0178408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT GTCTGTTAGT GATCGACGTG CAGGAGTCGT TCCGCCACCG CCCCTTTTTC 
TCGGAAGACG GCCTGCCCGC CTACCTCGCG GCGCAGAACG CGCTCATCGA GGGCTGCGAG
GCGCGCGGCA TTCCGGTCGT GCGGATACTG CACAGCGATG GTCCCGAAGA GGCATCGAAC
CCCTTCGCGC CTGCATCCGG GCATGTACGC CCCCTGGCCG GGCTGGCCGG GTCCGCGCCC
GCGGCGGAAT TCACCAAGCA CCGCCACAGC GCGCTGGTGG GCACCGGCCT GGACGTCTGG
CTCACGCGCC AGGGTATCGG CCGGCTGATC GTGAGCGGCA TCCGCACCGA ACAGTGCTGC
GAGACCACCA CGCGCCACGC CAGCGACCTG GGCTGGGAAG TGGACTATGT GGGCGAGGCC
ACGCTGACCT GGGACATGCG CCAGCCCGAC GGCCGGGTGC TGACGGCGGC GGACATCCTG
GCCCGTACGG AGACCGTGCT CGCAGGCCGC TTCGCCACCC TGTGCACGGT GGCCCAGGCG
CTGTCCCGCG CGGGGGCAGG CACTGAAGCG GCCCTTGCCG GAGAGGCGGC ATGA
 
Protein sequence
MKACLLVIDV QESFRHRPFF SEDGLPAYLA AQNALIEGCE ARGIPVVRIL HSDGPEEASN 
PFAPASGHVR PLAGLAGSAP AAEFTKHRHS ALVGTGLDVW LTRQGIGRLI VSGIRTEQCC
ETTTRHASDL GWEVDYVGEA TLTWDMRQPD GRVLTAADIL ARTETVLAGR FATLCTVAQA
LSRAGAGTEA ALAGEAA