Gene Aave_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1952 
Symbol 
ID4669168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2114733 
End bp2115944 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID639823162 
Productacyltransferase family protein 
Protein accessionYP_970310 
Protein GI120610632 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00838522 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCGGC GCCCGAAGCG CACTCCACTC ATGCCCGAAA CGTCCACTTC CCGCCGCTGG 
GAGATCGATG CCGTGCGAGG ACTCATGCTG GTCCTCATGA CGGTCACCCA TCTGCCCACG
CGGCTCACGA TGCCGCTCGG CCAGCCCTTC GGCTTCGTCT CCGCGGCCGA GGGGTTCGTG
CTGCTGTCCG CCTACATGGC GGGCATGGTG TACGGACGCA CCGCCGCGCG CCGCGGCATC
CCGGCCATGC GACAGGCCTT CCTCCGCCGG GCCACCAAGA TCTACGCCTG TCAGGCGGCC
ACCCTGCTCT TCCTGTTCAC CGTGATCACC TTCATCGGCA TCCGGGTGGA CGAGCCGGCC
ATCAAGGGCC TGCTCACCTT CTACCTCGCC AAGCCGCTCG AAGCGCTGGT CGGCGGGCTG
CTGCTCGTGT ACGAACCGCC CCTGCTCGAC ATCCTGCCCA TCTACGTGCT GTTCATGCTC
GCGAGCCCGT GGGTGATGTC GGTCGGGCTG CGGCGCGGCT GGGCGCCGGT GCTGGCCGTG
AGCACCGCGC TGTGGTTCCT GGCGCAGTTC GGGCTCTCGA AGGCGTTCTA CGACGCCATC
GACGCGGTGG TCCGCAACCC CATCCCGTTC CACGAGACAG GCACCTTCTC GATGTGGGGA
TGGCAGTTCC TCTGGGTGCT GGGCCTGTGG ATGGGCGCGT CGCGCAACGA TCCCGAAGCG
CCTCCCTTCA TCTTCCCGCG CTGGGCGGTG GGGGTGGCGG CGGCCATCGC GGTGGTGGGT
TTCTGCTGGC GCCACGCGAT CGGCCAGGTT CCCTTCGGCG ACGGCCTGCC CGCCTGGAAC
CTGGCGTTCG ACAAGTGGCA GCTGGGGCCG CTGCGGGTGC TCAACCTGTT CGCGCTGCTC
GTGCTCGCGA TCCGGTTCGG TCCGTCCCTG GCGGCGCGCA TGCCGCGGCC ACGCTGGCTG
GAAACGCTGG GGGCTGCCTC CCTGCCGGTG TTCTGCGCGC ACCTCGTGGT GGTGCTGCTC
GCCATCAGCC TGATGGGGGC ACGCTACGAC CGGCCCTGGT GGCAGGACAT CGCCCTGCTG
GCCGCCTGCT TCGCGGCCCT GCACGCCGTA GCGCGGGTCA GCCTGTGGTG GGACAAGGGG
CCGGACGAGG ATGCGCCGGG CACCCGCCGC AGGCTGCTGC GCCTGCGGAG GCCCCTGCCC
CCGGCGCTGT AG
 
Protein sequence
MARRPKRTPL MPETSTSRRW EIDAVRGLML VLMTVTHLPT RLTMPLGQPF GFVSAAEGFV 
LLSAYMAGMV YGRTAARRGI PAMRQAFLRR ATKIYACQAA TLLFLFTVIT FIGIRVDEPA
IKGLLTFYLA KPLEALVGGL LLVYEPPLLD ILPIYVLFML ASPWVMSVGL RRGWAPVLAV
STALWFLAQF GLSKAFYDAI DAVVRNPIPF HETGTFSMWG WQFLWVLGLW MGASRNDPEA
PPFIFPRWAV GVAAAIAVVG FCWRHAIGQV PFGDGLPAWN LAFDKWQLGP LRVLNLFALL
VLAIRFGPSL AARMPRPRWL ETLGAASLPV FCAHLVVVLL AISLMGARYD RPWWQDIALL
AACFAALHAV ARVSLWWDKG PDEDAPGTRR RLLRLRRPLP PAL