| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1932 |
|---|
| Symbol | |
|---|
| ID | 4667162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2095290 |
|---|
| End bp | 2096153 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639823142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970290 |
|---|
| Protein GI | 120610612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.165659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0202877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTAC CCCGCCCGTT TCTGCCCCAG GAAATCCGCC CCGCCTGTGG GGAACAGCAA
CGGCTGACGG CCCGCCATCT CCAGGGCTGT ATTCCCGAGC TGGAGGGTTA TCTGCACGCG
CTGCGCCGCG AGGTCGACGA CGAACTGCGG GGCACCACAC CCCCGTACCG CAAGCCCTAC
CCCTACGGCT GCTGCCTGGA AATTTCCCAG GCGTTCGAGC GCAAACTGCG CGCGGCGGTG
GCATCGGAGG CTTCGCGGCC CGGCCTGGAT GCCATCCGTG CCTTCATGCA GGAGGGTGGC
TACGTTGGCA GCGTGTGGGG CGCGCTGCGC GAGCGCTACT TCCAGAACGC GTTCCAGTTC
GGCAGCCTGT ACGTCGACGT CTCCAACGAC ACGGTGGACG TGCGCAAGCC CGCCATCGAA
ATCCTGCCCA TGGCCGAATC CGGCCTGCTG AACGTGTCCG ACGTGGCGCA TTTCGTCCGC
ATCGCGCGTG CCTACTGGGA AGGGGAGTAC TACGTCAACG ACGTGTGGCC GGCGCTGGCG
CCGATCGCTC CGGTGGTGAT GGTGGTGCCG GACCTGCAAC TGGTCCGGCT CCCGACCGGC
TCGGCCTACA TGGTGGGTTT GCAGCGCCGC GACCGCTACC AGTCTGCCGA GGCCTATCTT
GCCGAGGGCC CGGCGCTTCC CGCCGCGGCG CGCGAAGCGC TGCTGGCACG CCTCGCACCG
CGCAGGAAGG TGGCCGATGC CCGACAGGGG CGGGCGCTGT CCCTGGCCGC CTGCGCATCG
CTGCGCAAAG CCACGCCGCT CGAAGAGACG ATGTGGCTGA ACCGGCAGTG CGTGGAGTGG
GGCGCGTTCA ACCGCACGGC TTGA
|
|---|
| Protein sequence | MSVPRPFLPQ EIRPACGEQQ RLTARHLQGC IPELEGYLHA LRREVDDELR GTTPPYRKPY
PYGCCLEISQ AFERKLRAAV ASEASRPGLD AIRAFMQEGG YVGSVWGALR ERYFQNAFQF
GSLYVDVSND TVDVRKPAIE ILPMAESGLL NVSDVAHFVR IARAYWEGEY YVNDVWPALA
PIAPVVMVVP DLQLVRLPTG SAYMVGLQRR DRYQSAEAYL AEGPALPAAA REALLARLAP
RRKVADARQG RALSLAACAS LRKATPLEET MWLNRQCVEW GAFNRTA
|
|---|
| |