| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1892 |
|---|
| Symbol | |
|---|
| ID | 4667128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2046788 |
|---|
| End bp | 2048149 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639823101 |
|---|
| Product | Ste24 endopeptidase |
|---|
| Protein accession | YP_970250 |
|---|
| Protein GI | 120610572 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.35497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCC GCGAAGCCCT AAACTCCCGG TACATGCCTC CCGCCCCCGA TACCGCCTCC
TACTTCACCA CGCCCGCCGG CCTGCTGACC GCGGCCTTCG CCCTGCTGCT GGCCGCCGGC
CTGCTGGTGC GCTTCTGGCT GGCGTCCCGG CAGATCCGGC ACGTCGCGCG CCACCGCGGC
ACCGTCCCGG AGCCGTTCGC AGGGCGCATC CCCCTCGCCG CCCACCAGAA AGCCGCGGAC
TACACCATCG CCAGGGCCCG GCTGGGCATG CTGGAAGCCG CCCTGGGCGC TGCCGTGCTG
CTGGGCTGGA CGCTGCTGGG CGGACTGAAC GCGCTCAACC AGGCGCTGCT GTCCGTGCTG
GACGGCGGCA TGGTGCAGCA GATCGCATTG CTGGCGGCGT TCGCGCTGGT GAGCGGGCTC
ATCGACCTGC CCCTCGCGGC CTACCAGACC TTCGTGCTCG AAGAGCGCTT CGGCTTCAAC
AAGACCACGC CGCGCCTCTG GCTGAAGGAC CTGGCGCAGT CCACGCTGAT GGGCGCCGTG
ATCGGGCTGC CGCTGGCCGC GCTGATCCTC TGGCTCATGG GGGCCGCGGG CGCCCTGTGG
TGGCTCTGGG CCTGGGGCGC CTGGGTGGCT TTCAGCCTGG CGCTGATGGT GATCTATCCG
CTGTTCATCG CGCCGCTCTT CAACCGCTTC CAGCCGCTGG AGGACGAATC CCTCAAGGCC
CGCGTCACGT CGCTCATGCA GCGCTGCGGC TTCGCGGCCA AGGGGCTGTT CGTGATGGAC
GGCAGCCGGC GCAGCGCCCA TGCCAACGCG TACTTCACGG GCTTCGGGGC CGCGAAGCGG
GTGGTGTTCT ACGACACCCT GCTGCGCCAG CTCGGGCCGG ACGAGGTCGA AGCCGTGCTC
GCGCACGAAC TCGGCCACTT CAAGCACCGC CACATCGCCA AGCGCATGGC GGGCGTGTTC
GCGATGGCAC TGCTCGGTTT CGCGCTGCTG GGCTGGCTTT CGGGGCAGAC CTGGTTCTAC
GAAGGCCTGG GCGTGCAGCC CGCCGCCCTG CTCCCGGGCC AGCCGGCGGG CTCGGCCTCC
AACGACGCGC TGGCGCTGCT GCTGTTCCTG CTGGCCACAC CCGTGCTGAC CTTCTTCGTC
TCGCCGGTTT TCGCCCAGTT GTCGCGCCGC GACGAATTCG AGGCGGATGC CTATGCCATG
GCGCAGGCCG AAGGCAGCGC CCTCGCCTCC GCACTGCTCA AGCTCTACGA GGACAACGCC
TCCACGCTCA CGCCGGACCC GGTGTACGCG GGGTTCTACT ACTCCCACCC GCCGGCCGGC
GAACGGCTGG CCCGCATGCC CCTTCCCCAG CCATCGACAT GA
|
|---|
| Protein sequence | MPVREALNSR YMPPAPDTAS YFTTPAGLLT AAFALLLAAG LLVRFWLASR QIRHVARHRG
TVPEPFAGRI PLAAHQKAAD YTIARARLGM LEAALGAAVL LGWTLLGGLN ALNQALLSVL
DGGMVQQIAL LAAFALVSGL IDLPLAAYQT FVLEERFGFN KTTPRLWLKD LAQSTLMGAV
IGLPLAALIL WLMGAAGALW WLWAWGAWVA FSLALMVIYP LFIAPLFNRF QPLEDESLKA
RVTSLMQRCG FAAKGLFVMD GSRRSAHANA YFTGFGAAKR VVFYDTLLRQ LGPDEVEAVL
AHELGHFKHR HIAKRMAGVF AMALLGFALL GWLSGQTWFY EGLGVQPAAL LPGQPAGSAS
NDALALLLFL LATPVLTFFV SPVFAQLSRR DEFEADAYAM AQAEGSALAS ALLKLYEDNA
STLTPDPVYA GFYYSHPPAG ERLARMPLPQ PST
|
|---|
| |