| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1864 |
|---|
| Symbol | |
|---|
| ID | 4669608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2019048 |
|---|
| End bp | 2020283 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823067 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_970222 |
|---|
| Protein GI | 120610544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.800927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCATG ACAGAACGAA CGGCGCCGGG GGGCTTCCCG ACGGCCTGCA TCCCGACACG
CTCGCCGTGC GGGAATCCAT TCCGCGCAGC CAGTACGGGG AGCATTCCGA AGCGCTCTAC
CTGAGCAGCA GCTTCGTGCA GCCCGATGCG CAGACCGCCG CGCTGCGCTT CGCGGGCGAG
GAAGACGGCT ACACCTATAC GCGCACGGCC AATCCCACGG TGACGGCCTT CGAGCGGCGG
CTGGCCGCCA TGGAGGGCAC CGAGACCGCC ATCGGCACGG CCACCGGCAT GTCCGCCATC
CTGCTCATGT GCCTGGCGCT GCTCAAGGCG GGCGACCACG TGGTGTGCTC GCAGTCGATG
TTCGGCTCCA CCATCAAGCT GATCGGCGGC GAGCTGTCGC GCTTCGGCGT CGAGACCACC
TTCGTGCCGC AGACGGATGC CGCCGCCTGG AAGGCCGCGC TGCGCCCCGC GACGCGCCTG
ATGTTCGCCG AGACGCCCAC CAACCCGCTC ACCGACCTGT GCGACATCGC CGCGCTGTCG
GCCATCGCGC GCGAGGCCGG CGTGCTGCTG GCCGTGGACA ACTGCTTCGC TTCGCCCGCC
CTGCAGCAGC CGGCGAAGTG GGGCGCCGAC CTCGTCATCC ATTCCGGCAC CAAGTTCCTC
GACGGCCAGG GCCGCGTCAT GGCCGGCGCC GTGTGCGGCC CGCGCTCGCT CATCGACGAC
AAGCTGGGCC CCATGATCCG CAGCGCGGGC ATGAACCTGT CGCCCTTCAA CGCCTGGGTG
GTGCTCAAGG GGCTGGAGAC GCTGTCCATC CGCGTGCGGG CCCAGGCCGA CAATGCCCTG
CGCCTGGCCA CGTGGCTTCA GGCGCATCCC GGCGTGGCGC GCGTCTATTA CCCGGGCCTC
GCCTCGCATC CCCAGCATGC GCTGGCGATG CGCCAGCAAT CCGGCCTGGG CGGCGCGGTG
CTCTCCTTCG ACGTGAAGTC GCAGGGCGAT GCCGATGCGG CGCGCCGCAG CGCCTTCCAC
GTCATCGACA GCACGCGCGT GTGCAGCATC ACCGCCAACC TCGGCGACGT GAAGACCACC
GTCACCCATC CCGCGAGCAC CTCGCACGGG CGCCTGACCG AGGCGCAGCG CCAGGCCGCC
GGCATCGGCC AGGGGCTGAT CCGCGTGGCC GTCGGCCTGG AACACATCGA AGACCTGAAG
GCCGACCTCG CGCGCGGCCT GGATACCCTG CAATGA
|
|---|
| Protein sequence | MAHDRTNGAG GLPDGLHPDT LAVRESIPRS QYGEHSEALY LSSSFVQPDA QTAALRFAGE
EDGYTYTRTA NPTVTAFERR LAAMEGTETA IGTATGMSAI LLMCLALLKA GDHVVCSQSM
FGSTIKLIGG ELSRFGVETT FVPQTDAAAW KAALRPATRL MFAETPTNPL TDLCDIAALS
AIAREAGVLL AVDNCFASPA LQQPAKWGAD LVIHSGTKFL DGQGRVMAGA VCGPRSLIDD
KLGPMIRSAG MNLSPFNAWV VLKGLETLSI RVRAQADNAL RLATWLQAHP GVARVYYPGL
ASHPQHALAM RQQSGLGGAV LSFDVKSQGD ADAARRSAFH VIDSTRVCSI TANLGDVKTT
VTHPASTSHG RLTEAQRQAA GIGQGLIRVA VGLEHIEDLK ADLARGLDTL Q
|
|---|
| |