Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1829 |
Symbol | |
ID | 4665566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1982450 |
End bp | 1983628 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823031 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_970187 |
Protein GI | 120610509 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.487649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC GCCTTACCGT CCTGGGTTCC ACCGGCTCCA TCGGAACCAG TACCCTGGAC GTGGTCGCGC GCCACCCCGG CCGCTACGAG ATCTTCGCGC TGAGCGCCGC CACGCAGGTG GACGCCATGG CGGCGCAGTG CCTGCGCTTT GGTCCGCGCT ACGCGGTCAT GGCGAGCCCG GAGCATGCCC GCGCGCTGCG GGAGGCACTG GCCGCGCAGG GGTCGTCCAC CGAGGTGATG GACACCCCCG ATGCCCTGCA GGCGATCTCC GCCCATCCCG AGGTGGACGT GGTCATGGCG GCCATCGTCG GCGCCGCCGG GCTCGCTCCC TGCCTGGCCG CCGCGCGCGC GGGCAAGCGC CTGCTGCTGG CGAACAAGGA AGCGCTGGTC GTGGGCGGCG AGGTGTTCAT GTCCGCGGTG CGCGAGGGCG GCGCCACGCT GCTGCCCATC GACAGCGAGC ATTCCGCCAT CTTCCAGTGC CTGCCGGAGG ATGCGTCCTC CTGGCCGCGG CGCGTGGACC ACATCCTGCT CACCGCGTCC GGCGGCCCGT TCCGCACGCG CGAGCCCGCC ACCCTGCGCG ACGTGACACC CGAGCAGGCC TGTGCCCATC CCAACTTCTC CATGGGGCGC AAGATCTCGG TGGATTCCGC GACCATGATG AACAAGGCGC TGGAAGTGAT CGAGGCGCGC TGGCTGTTCA ATCTGGCGCC GGAACAGATC CAGGTGGTCA TCCATCCGCA GCAGATCATC CATTCGATGG TGCAGTTCAA GGACGCCTCG GTGCTGGCCC AACTGGGCAC GCCCGACATG CGCGTGCCCA TCGCCTGCGG CCTCGCCTGG CCCGAGCGCA TCGAGAGCGG CACGCCCCGG CTCGATTTCC GCAGCCTGGC CGCCCTGACC TTCGAGGAAG CCGACGCCAC GCGCTTTCCC GGGCTGCACC TGTCGTGGCA GGCCCTGCGT GCCGCGCCGG GCACCACCGC GGTGCTCAAT GCGGCCAACG AGGTGGCGGT GGCGTCGTTC CTGGAACGCC GCATCCGCTT CGACCAGATC CACCGGCTGA ATCTTGCAAC TCTGGAGGCG GTATCGCCCT CCAACCCGGA CTCGCTGTGC GCATTGCTCG ACCTCGACGC CCAGGCGCGT TCGGTCGCGC GGCACCGGGC AGAGCGGCTC GCGGCCTGA
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Protein sequence | MKQRLTVLGS TGSIGTSTLD VVARHPGRYE IFALSAATQV DAMAAQCLRF GPRYAVMASP EHARALREAL AAQGSSTEVM DTPDALQAIS AHPEVDVVMA AIVGAAGLAP CLAAARAGKR LLLANKEALV VGGEVFMSAV REGGATLLPI DSEHSAIFQC LPEDASSWPR RVDHILLTAS GGPFRTREPA TLRDVTPEQA CAHPNFSMGR KISVDSATMM NKALEVIEAR WLFNLAPEQI QVVIHPQQII HSMVQFKDAS VLAQLGTPDM RVPIACGLAW PERIESGTPR LDFRSLAALT FEEADATRFP GLHLSWQALR AAPGTTAVLN AANEVAVASF LERRIRFDQI HRLNLATLEA VSPSNPDSLC ALLDLDAQAR SVARHRAERL AA
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