| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1824 |
|---|
| Symbol | tsf |
|---|
| ID | 4665653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1978518 |
|---|
| End bp | 1979414 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823026 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_970182 |
|---|
| Protein GI | 120610504 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.31491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA TTACCGCTAG CATGGTTGCC GAACTGCGCG CCAAGACCGA CGCTCCCATG
ATGGAGTGCA AGAAGGCCCT GACGGAAGCC GACGGCGACC TGGCCAAGGC CGAGGAGCTG
CTGCGCGTCA AGCTGGGCAC CAAGGCTGGC AAGGCTGCCG CCCGCATCAC CGCCGAAGGC
GTGGTCGCCA GCTTCATCGA GGGCACGACC GGCGCCCTGA TCGAAGTGAA CAGCGAAACC
GACTTCGTGA GCAAGAACGA CAGCTTCATC GCCCTGGCCA AGGCTGCGGC CGAGCTGGTC
GCCAAGCACA ACCCCGCCGA CGTGGAAGCC CTGGGCGCGC TGCCCTACAG CCAGGAAAGC
TTCGGCCCCA CGCTGGAAGA AGTGCGCAAG GGCCTGATCG GCAAGATCGG CGAGAACATG
TCCTTCCGCC GCTTCAAGCG CTTCTCGGGC TCCAAGCTGG CTTCCTACCT GCACGGCACC
CGCATCGGCG TGGTGGTGGA GTTCGACGGC GACGAAACCG CCGCCAAGGA CGTCGCGATG
CACATCGCCG CCATGAAGCC CGTGGCCCTG ACCAGCGCCG ACGTGCCCGC CGAGCTGATC
GAGAAGGAGC GCACCGTCGC TGCCGCCAAG GCCGCCGAAT CCGGCAAGCC TGCCGACATC
GCCGCCAAGA TGGTGGAAGG CTCGGTGCAG AAGTACCTCA AGGAAGTCTC GCTGTTCGAC
CAGGTCTTCG TGAAGGCCGC CGACGGCAAG CAGACCGTGG GCCAGATGCT CAAGGCCGCC
AACACCACCG TGAAGGGCTT CACGCTCTAC GTCGTGGGCG AAGGCATCGA GAAGAAGGTG
GACGACTTCG CGGCGGAAGT GGCCGCGCAG GTGGCCGCCG CCAAGGCCGC TGCCTGA
|
|---|
| Protein sequence | MAAITASMVA ELRAKTDAPM MECKKALTEA DGDLAKAEEL LRVKLGTKAG KAAARITAEG
VVASFIEGTT GALIEVNSET DFVSKNDSFI ALAKAAAELV AKHNPADVEA LGALPYSQES
FGPTLEEVRK GLIGKIGENM SFRRFKRFSG SKLASYLHGT RIGVVVEFDG DETAAKDVAM
HIAAMKPVAL TSADVPAELI EKERTVAAAK AAESGKPADI AAKMVEGSVQ KYLKEVSLFD
QVFVKAADGK QTVGQMLKAA NTTVKGFTLY VVGEGIEKKV DDFAAEVAAQ VAAAKAAA
|
|---|
| |