Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1646 |
Symbol | |
ID | 4667800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1804648 |
End bp | 1805967 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822847 |
Product | general substrate transporter |
Protein accession | YP_970007 |
Protein GI | 120610329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCTT CACACCAATC CTTCATCGCG GCTTCCGGCA GCGAAGCCGC CCCGTCCGCG CCCGCGCAGT CCAAGGTGGG CACCGTCCTG CGCGTGACGG GCGGCAATTT CATGGAGATG TTCGATTTTT TCCTGTTCGG CTTCTACGCC ACGCAGATCT CCAAGGCGTT CTTCCCCGCA GGCAACGAGT TCGCCTCGCT CATGCTGACG TTCATGACCT TCGGCGCGGG CTTCCTCATG CGGCCGCTGG GGGCGGTGTT CCTCGGGGCG TACGTGGACC GCGTCGGCCG CCGCAAGGGG CTGATCGTGA CGCTGGCGCT GATGGCGCTG GGCACGCTGC TGATCGCCTG CGTGCCCGGC CACGCCACCA TCGGCCTGGC GGCGCCGCTG CTGGTGCTGA TCGGGCGCCT GCTGCAGGGC TTCTCGGCCG GCGTGGAGCT GGGCGGGGTG TCGGTGTACC TTGCCGAGAT AGCGACACCG GGCCGCAAGG GCTTCTACGT GAGCTGGCAG TCGGCCAGCC AGCAGGTGGC GATCATCGTC GCGGCGGCGC TGGGCTACTG GCTCAACGTG ACCTTCGTGC CGCAGGAGAT CGCGGACTTC TACTGGCGGG TGCCGTTCTT CGTGGGTTGC CTGATCGTGC CGGTGCTGTT CATCATCCGC CGCTCGCTGC AGGAGACCGA GGAGTTCAAG GCGCGCAGGC ACCGTCCTTC CACGCGCGAG ATCTTCCGCT CCATCGTCTC CAACTGGGGC TTGGTGATCG CGGGGATGAT GATGGTGTCG ATGACGACCG TGTCGTTCTA CCTCATCACC GTGTACACGC CGACCTTCGG CAAGAGCGTG CTGCACCTGA GCACCACGGA CGCGCTGGTC GTGACGCTGT GCGTGGCGCT GTCCAACTTC TTCTGGCTGC CGGTGATGGG CGCGCTCTCC GACCGCGTGG GCCGCAAGCC GCTGCTGGTG GCCTTCACCG TGCTGACCAT CTTCACCGCC TATCCGGCCC TGAAGTGGCT GGTGGCCGCT CCCGATTTCG CGCGCATGCT GGAGGTGGAG CTGTGGCTGT CCTTCCTGTA CGCGAGCTAC AACGGCGCGA TGGTCGTCGC GCTGACCGAG GTGATGCCGG TGGACGTGCG CACGGTGGGC TTCTCGCTGG CCTACAGCCT GGCGACCGCG GTGTTCGGCG GCTTCACGCC GGCCGTCGCC ACGGGCCTGA TCGAATGGTC GGGCGACAAG GCCGCTCCGG GCTGGTGGAT GACGGCCGCC GCGGTCTGCG GCCTGCTGGC CACGCTGCGG CTGTACCGCC GCGCGGCCGG CCGCGGCTGA
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Protein sequence | MTPSHQSFIA ASGSEAAPSA PAQSKVGTVL RVTGGNFMEM FDFFLFGFYA TQISKAFFPA GNEFASLMLT FMTFGAGFLM RPLGAVFLGA YVDRVGRRKG LIVTLALMAL GTLLIACVPG HATIGLAAPL LVLIGRLLQG FSAGVELGGV SVYLAEIATP GRKGFYVSWQ SASQQVAIIV AAALGYWLNV TFVPQEIADF YWRVPFFVGC LIVPVLFIIR RSLQETEEFK ARRHRPSTRE IFRSIVSNWG LVIAGMMMVS MTTVSFYLIT VYTPTFGKSV LHLSTTDALV VTLCVALSNF FWLPVMGALS DRVGRKPLLV AFTVLTIFTA YPALKWLVAA PDFARMLEVE LWLSFLYASY NGAMVVALTE VMPVDVRTVG FSLAYSLATA VFGGFTPAVA TGLIEWSGDK AAPGWWMTAA AVCGLLATLR LYRRAAGRG
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