| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1645 |
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| Symbol | rimO |
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| ID | 4666756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1802834 |
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| End bp | 1804225 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822846 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_970006 |
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| Protein GI | 120610328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA CGATTGCACC GGCCCGCCTG CCGCGTATAG GTATGGTATC CCTCGGGTGC
CCGAAGGCCC TCACGGATTC CGAACTCATC CTCACGCAGC TGAGCGCCGA GGGTTACCAG
ACTTCCAAGA CCTTCGAGGG CGCCGACCTC GTCATCGTCA ACACCTGCGG CTTCATCGAC
GATGCCGTGA AGGAAAGCCT CGACACCATC GGCGAGGCGC TGGCCGAGAA CGGCAAGGTG
ATCGTCACCG GCTGCCTGGG CGCGCGCGCG GGCGAGGGCG GCGGCAACCT GGTGCGCGAA
ATGCACCCTA GCGTGCTGGC CGTGACCGGC CCGCATGCCA CGCAGGAGGT GATGGACGCC
GTCCACCAGA ACCTGCCCAA GCCGCACGAT CCGTTCATCG ACCTCGTGCC CGGCGGCTTC
GGCGTGGCGG GCGTGAAGCT CACGCCCAGG CACTATGCGT ACCTGAAGAT CAGCGAGGGC
TGCAACCACC GCTGCACCTT CTGCATCATC CCCTCGATGC GCGGCGACCT GGTCTCGCGC
CCCGTGGGCG ATGTGCTGAG CGAGGCGAAG GCGCTCTTCG AGGGTGGCGT GAAGGAACTG
CTGGTGATCA GCCAGGACAC GTCCGCCTAC GGCGTGGACG TGAAGTACCG CACCGGCTTC
TGGGACGGCA AGCCGGTCAA GACGCGCATG CTGGAGCTGG TGCAGACGCT GGGCGAGATC
GCCGAGCCCT ACGGCGCCTG GGTGCGCCTG CATTACGTGT ATCCGTACCC CAGCGTGGAC
GAGGTGATCC CGTTCATGGC CACGGGCAAG ATCCTGCCCT ACCTGGACGT GCCGTTCCAG
CACAGCCACC CCGACGTGCT CCGGCGCATG AAGCGGCCTG CGAGCGGCGA GCGCAACCTG
GAGCGCATCC AGCGCTGGCG CGAGGCCTGC CCGGAGCTGG TGATCCGCAG CACCTTCATC
GCGGGCTTCC CCGGCGAGAC GGAAGAAGAA TTCCAGCACC TGCTGGACTT CCTGCGCGAA
GCGCAGATCG ACCGCGCGGG CTGCTTCGCC TACAGCGACG TGGACGGCGC CGTCGCGAAC
GAGCTTCCCG GCATGCTGCC GATGGAAGTG CGCGAGGAGC GCCGCGCGCG CTTCATGGCC
GTGGCCGAAG AGGTTTCCAT CGAACGCCTG CGCCGCCGCG TGGGCGCGAC CATGCAGGTG
CTGGTGGACC ATGCCCCGGC GCTGGGCCGC AAGGGCGGCC GGGGCCGCAG CTATGCCGAT
GCGCCGGAAA TCGACGGCGT GGTGCACCTG CTGCCGCCCG AGAAGATCAG CAAGCAGCTG
AAGGTGGGCG AATTCACGCG CGCGCAGATC GTGGGCGTGC AGGGGCACGA CCTGGTCGCA
AGACCGATCT GA
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| Protein sequence | MNETIAPARL PRIGMVSLGC PKALTDSELI LTQLSAEGYQ TSKTFEGADL VIVNTCGFID
DAVKESLDTI GEALAENGKV IVTGCLGARA GEGGGNLVRE MHPSVLAVTG PHATQEVMDA
VHQNLPKPHD PFIDLVPGGF GVAGVKLTPR HYAYLKISEG CNHRCTFCII PSMRGDLVSR
PVGDVLSEAK ALFEGGVKEL LVISQDTSAY GVDVKYRTGF WDGKPVKTRM LELVQTLGEI
AEPYGAWVRL HYVYPYPSVD EVIPFMATGK ILPYLDVPFQ HSHPDVLRRM KRPASGERNL
ERIQRWREAC PELVIRSTFI AGFPGETEEE FQHLLDFLRE AQIDRAGCFA YSDVDGAVAN
ELPGMLPMEV REERRARFMA VAEEVSIERL RRRVGATMQV LVDHAPALGR KGGRGRSYAD
APEIDGVVHL LPPEKISKQL KVGEFTRAQI VGVQGHDLVA RPI
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