Gene Aave_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1597 
Symbol 
ID4669859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1762602 
End bp1763141 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID639822798 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_969958 
Protein GI120610280 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGATT CCCCGTCCGA ATCCCCATCG CCCCGCGCCC CGCAGCGGGT CATCAAGAAG 
TATCCGAACC GCCGGCTCTA CGACACCTCC ACCTCCACCT ACATCACGCT GGCGGAAGTC
AAGCAGCTCG TCATCGACGG CGAGGAAGTG GCCGTGCGCG ACGCCAAGAC CGGCGAGGAC
CTCACGCGCA GCATCCTCCT GCAGATCATC CTGGAAGAAG AGGCCGGCGG CGCGCCCATG
TTCACCGAGG CCGTGCTGGC CAACATCATC CGCTTCTACG GCCACGCGAT GCAGGGCTTC
ATGGGCGCCT ACCTGGAGAA GAACGTGCAG ATGTTCTCGG ACTTCCAGGC GCGCGTGGCC
GAGCAGTCGC AGGGCTTCAC GCCCGAGATG TGGACCCAGT TCATGAACCC GCAGTCGCCG
CTCTACCAGG GCGTGATGGG GCAGTACCGC GACCAGTCGC AGGCCATGTT CACGCAGATG
CAGGAGCAGA TGCAGAAGCA GACGGAGCAG ATGCTGAACG CCTTCGGCAT CAAGCGCTGA
 
Protein sequence
MPDSPSESPS PRAPQRVIKK YPNRRLYDTS TSTYITLAEV KQLVIDGEEV AVRDAKTGED 
LTRSILLQII LEEEAGGAPM FTEAVLANII RFYGHAMQGF MGAYLEKNVQ MFSDFQARVA
EQSQGFTPEM WTQFMNPQSP LYQGVMGQYR DQSQAMFTQM QEQMQKQTEQ MLNAFGIKR