Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1519 |
Symbol | |
ID | 4665086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1684676 |
End bp | 1685122 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822721 |
Product | UspA domain-containing protein |
Protein accession | YP_969882 |
Protein GI | 120610204 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0716802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.348047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTACC GCCGCATCCT CATCGCCACC GACGGCTCCG ACCTGTCCGC CAAGGCCGTC GAGCACGGGC TGTCCCTGGC CCGGCTCTCG GGCGGCCGCG TGGTCGCGCT CAAGGTCGTG CCGCGCTACC CGCGCAGCTA CTTCGAGGGC GGCTCGCCGG TGGATGCCGC CGAGGCGCGG CGCATCGAGA GCCAGTGGGC CACCAACGCC CAGGCGCTGG TGGACGGCAT CCGGCAGCTG GGCGATGCCC AGGGGGTGAA GGTCAAGCCC GTGGTGACCA AGTCGGACCT CGTCGCCGAG GCGATCATCG CCGCGGCCAC CAAGCACGAC TGCGACCTCG TCGTGATGGC CTCGCACGGC CGCAAGGGCA TCAAGCGCCT GCTGCTGGGC AGCGAGACCC AGCACGTGCT CACGCACTCG AAGGTGCCCG TGCTCGTGCT GCGCTGA
|
Protein sequence | MSYRRILIAT DGSDLSAKAV EHGLSLARLS GGRVVALKVV PRYPRSYFEG GSPVDAAEAR RIESQWATNA QALVDGIRQL GDAQGVKVKP VVTKSDLVAE AIIAAATKHD CDLVVMASHG RKGIKRLLLG SETQHVLTHS KVPVLVLR
|
| |