Gene Aave_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1519 
Symbol 
ID4665086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1684676 
End bp1685122 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID639822721 
ProductUspA domain-containing protein 
Protein accessionYP_969882 
Protein GI120610204 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0716802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.348047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACC GCCGCATCCT CATCGCCACC GACGGCTCCG ACCTGTCCGC CAAGGCCGTC 
GAGCACGGGC TGTCCCTGGC CCGGCTCTCG GGCGGCCGCG TGGTCGCGCT CAAGGTCGTG
CCGCGCTACC CGCGCAGCTA CTTCGAGGGC GGCTCGCCGG TGGATGCCGC CGAGGCGCGG
CGCATCGAGA GCCAGTGGGC CACCAACGCC CAGGCGCTGG TGGACGGCAT CCGGCAGCTG
GGCGATGCCC AGGGGGTGAA GGTCAAGCCC GTGGTGACCA AGTCGGACCT CGTCGCCGAG
GCGATCATCG CCGCGGCCAC CAAGCACGAC TGCGACCTCG TCGTGATGGC CTCGCACGGC
CGCAAGGGCA TCAAGCGCCT GCTGCTGGGC AGCGAGACCC AGCACGTGCT CACGCACTCG
AAGGTGCCCG TGCTCGTGCT GCGCTGA
 
Protein sequence
MSYRRILIAT DGSDLSAKAV EHGLSLARLS GGRVVALKVV PRYPRSYFEG GSPVDAAEAR 
RIESQWATNA QALVDGIRQL GDAQGVKVKP VVTKSDLVAE AIIAAATKHD CDLVVMASHG
RKGIKRLLLG SETQHVLTHS KVPVLVLR