Gene Aave_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1515 
Symbol 
ID4665941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1679854 
End bp1681473 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content69% 
IMG OID639822717 
Productmalonyl-CoA synthase 
Protein accessionYP_969878 
Protein GI120610200 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.624521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.177064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC AACCGCTCGC ACCGTCTTCC CCCGCACCGG AGCCCGCACC GTCCGCCGGC 
CACCAGAACC TCTACAGCGC CCTGCGCGCC GCCTTCCCGG CGGACCTGGA CGGCATCGCC
GTGGAGGCCA CGTCGCCCGA GGGGCTGCCC CTGCACTACA GCTGGGCGGA CCTGGAGCAC
GCCAGCGCGC GCATCGCCAA CCTGTTCGCC TCGCTGAAGC TGCCCGAGGG CAGCCGCATC
GCGGTGCAGG TGGAGAAGTC GGTCGAGGCC ATGCTGCTGT ACCTCGCGAC ACTGCGCGCC
GGTTTCGTGT TCCTGCCGCT GAACACCGCC TACCAGAGCG CGGAGATCGA ATACTTCATC
GGCAATGCCG AGCCGGCGGT GGTGGTCTGC ACGCCGGCGA ATTTCGGCTG GGTCTCCAAG
CTGGCCTTTA CGGCCGGTAC GGCGCACGTG TTCACGCTCG GCGACGACCG CACGGGCACG
CTGCTCGAGC GCGCGACGCA CCATTCCAGC GTGCACGAGC CGGTGGCACG GTCGGCGGAT
GACCTCGCCG CCATCCTCTA CACCAGCGGC ACCACGGGCC GCAGCAAGGG CGCGATGCTC
ACGCACGGCA ACCTGCTGTC GAACGCACTG GTGCTCAAGG ACTACTGGGG CTGGAAGCCC
GGCGACGTGC TGATCCACGC GCTGCCGATC TTCCATGTCC ACGGCCTGTT CGTGGCGATC
CACGGGGCGC TCATCAACGG CAGCCCGATG GTCTGGTTCG CGAAGTTCGA CCCGAAGGCC
GTGATCGCCG CGATGCCGCG AGCCACGGTG TTCATGGGCG TGCCCACGCT CTACGTGCGG
CTGCTGGCCG AGCCCGCGCT GAACCGCGAG TGCACGGCCC GCATGCGCCT GTTCGTGGCC
GGCTCCGCGC CGCTGCTGAT CGAGACGTTC AAGGAGTGGC AGGAACGCAC GGGCCACACC
ATCCTGGAGC GCTATGGAAT GAGCGAGACC ATCATGCTCA CCAGCAATCC GTACGCGGCC
GACCCGCGCC ACGGCGGGCA GGAGGAGCGC CGCGGAGGCA CCGTGGGCTT CCCGCTGCCG
GGCGTGGGCC TGCGCGTGGT GGACGACGCC GGGCAGCCGG TGGCCACCGA CGAGATCGGC
CACATCCAGG TGCAGGGCCC GAACGTGTTC CAGGGCTACT GGCGCATGCC GGAGAAGACG
AAGGAGGAGT TCGCCGTTGA CGCGCAGGGC GGCCGCTGGT TCAAGACGGG CGACGTGGGC
AAGGTCGATG CGCGGGGCTA TGTCCACATC GTGGGGCGCA GCAAGGACCT CATCATCTCC
GGCGGCTACA ACGTCTATCC GGCCGAGATC GAAGGCTTCA TCAACGAGAT GCCCGGCGTG
GCCGAGAGCG CGCTGGTGGG CGTGCCGCAC CCCGACTTCG GCGAGGTGGG CGTGGCGGTG
GTGATCGGCA AGCCCGGCGC GCAGCCCGAT GGCGAGGCGA TCATCGCGCA GCTCAAGGCG
CGCCTGGCGA ACTTCAAGAT TCCGAAGCGC TGCTTCGTGG CCGCCGAGCT GCCGCGCAAT
ACCATGGGCA AGGTGCAGAA GAACCTGCTG CGCGAGCAGT ACAAGGGGCT GTTCGGCTGA
 
Protein sequence
MSSQPLAPSS PAPEPAPSAG HQNLYSALRA AFPADLDGIA VEATSPEGLP LHYSWADLEH 
ASARIANLFA SLKLPEGSRI AVQVEKSVEA MLLYLATLRA GFVFLPLNTA YQSAEIEYFI
GNAEPAVVVC TPANFGWVSK LAFTAGTAHV FTLGDDRTGT LLERATHHSS VHEPVARSAD
DLAAILYTSG TTGRSKGAML THGNLLSNAL VLKDYWGWKP GDVLIHALPI FHVHGLFVAI
HGALINGSPM VWFAKFDPKA VIAAMPRATV FMGVPTLYVR LLAEPALNRE CTARMRLFVA
GSAPLLIETF KEWQERTGHT ILERYGMSET IMLTSNPYAA DPRHGGQEER RGGTVGFPLP
GVGLRVVDDA GQPVATDEIG HIQVQGPNVF QGYWRMPEKT KEEFAVDAQG GRWFKTGDVG
KVDARGYVHI VGRSKDLIIS GGYNVYPAEI EGFINEMPGV AESALVGVPH PDFGEVGVAV
VIGKPGAQPD GEAIIAQLKA RLANFKIPKR CFVAAELPRN TMGKVQKNLL REQYKGLFG