Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1481 |
Symbol | |
ID | 4667287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1638972 |
End bp | 1640138 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639822684 |
Product | hypothetical protein |
Protein accession | YP_969846 |
Protein GI | 120610168 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC GTGTGCCCGC GCAGGAGGAC TCCGCAATGC CGGAGGCGGG ACCGCGACCG GGGCAGGGGC CGGCGCCGGA TGCCGGCCTG GATGCGTCGG GGTTCTGGCA GCGCCTGCGG CGCGATCCGC ATCCGTTCGA CCTGTTCTTC GCGCTGCGCG TGCTGCAGGC GCGCAGCCGC GGCCATCCGC GCTTCGGCAA GGCCCTGCGC CCGCGGGACG AGCCGCTGCG CCTGGGCCAG GACCCGTCGC TGGCCTTCGC GCCCGCGACC CTCGCCGAGG TGCTGCCGGC CACGGCCGGC CAGCCCGAGC GCCTCACGGT CTGGAACTTC GGCCTCTATG GCCCCAACGG GCCGCTGCCC ACGCACTTGA CCGAGTACGT GCGCGAGCGG CTGCGGCAGC ACGACGACCC GACGATCGCG CGCTTCTCCG ACATCTTCCA CCACCGGCTG CTGCTGCTGT TCTTCCGGGC GTGGTCCGAC ACGCAGCCAG TGACCTCGCT CGACCGTCCG GACAGCGACC TGTTCGGGCG CCACCTGCGC AGCCTGATCG GCTATGGCGA GGCGTCCCAG CGCGACCGCG ACACCGTACC GGACCATGCC AAGCAGTACC TGGCGGGCCA CTGGACGCGC TGGACCCGCA ATCCCGAAGG CCTGGTGTCG GCCCTGCGGA TCTTCTTCGA AGTGCCCGTG GAACTGGTCG AGTTCACGCT GCATTACCTG GAGCTGGATC CGGAGCAGCA GACCACGCTG TCGCGCGTGC CGCGCAACGC GCGCCTGGGC GTGGACACGG TGGTGGGCAG CCGGGTGCCC GACGCGCAGG GCAAGTTCCG GCTGCGCATC GGCCCGCTGC CGCTCGCGCA GTACGAACGC TTCCTGCCGG GCGGCGAAGA CTTCCGGGCG CTGGTGGACT GGGTGCGCAA CTACGTCGGC ATCGAGTTCG CATGGGATTA CGAGCTGATC CTGCGCCGCG AGGATGTCCC GCCCTGCCAG CTCGGCGGCA GCGTCCGGCT GGGATGGACG ACGTGGTCCT TCTCCGGTCC CGCGCAGCGC GATCCGGACG ATTTCCGGCT GGACCCCGAA CTGTGGCTGG CATCGCGCAG GCGGGCCCGC GCGGATGCCG GTGCGGGATC GCGGGCCGGG CCCGTCCCGG CGGCCGAAGC GTCCTAG
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Protein sequence | MSDRVPAQED SAMPEAGPRP GQGPAPDAGL DASGFWQRLR RDPHPFDLFF ALRVLQARSR GHPRFGKALR PRDEPLRLGQ DPSLAFAPAT LAEVLPATAG QPERLTVWNF GLYGPNGPLP THLTEYVRER LRQHDDPTIA RFSDIFHHRL LLLFFRAWSD TQPVTSLDRP DSDLFGRHLR SLIGYGEASQ RDRDTVPDHA KQYLAGHWTR WTRNPEGLVS ALRIFFEVPV ELVEFTLHYL ELDPEQQTTL SRVPRNARLG VDTVVGSRVP DAQGKFRLRI GPLPLAQYER FLPGGEDFRA LVDWVRNYVG IEFAWDYELI LRREDVPPCQ LGGSVRLGWT TWSFSGPAQR DPDDFRLDPE LWLASRRRAR ADAGAGSRAG PVPAAEAS
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