Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1316 |
Symbol | |
ID | 4669625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1443781 |
End bp | 1445040 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822510 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_969681 |
Protein GI | 120610003 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCCA ACCCACCCAC CATGACCCCC CAGGGACCGG CCGGCACCGC GCCGGGCGCC ATGATCGCCC GGCAGGCGAT CGTCAACGGC CAGCACTCCG TGATCGGCTA CGAGCTGTTC AACCGGTCGC GCGCGGGCGT GGCGCACACC GCGGCCACCG ACGTCTTCCT CGTCTTCACG GCCCTGTCGC ACGCAGGCAC CGAAGAGCTG GTGGGCAAGA AGCTCATCTT CGTCAATTGC ACGCACGAAA GCCTGGCGGG CGGCCACCTC GAACTGGTGG ACCCGGACAA GGTGGTGCTG GAGATCCCGC CGCTCGGCCA TGCGGCCGCC GCCGAGGTCG GCACCCGCCT GCCGATCCTG CAGGCGCTGC GCGAGCGGGG GTTCCACCTG GCGTTCAACC ACACCGTGCT GGAATCCGCC TACGCTCCCT GGCTGCCGCT GGCCGACTAC ATCAAGCTCG ACCTTTCCCT GCTGGCGCCC GAACAGCTCG CGGTGCTCGT CAAGTACGCC GGACGTCACT CGCGCGCCGA ACTCATCGCG GAAAAGGTGG AAACCGCGCA GCAGTACGAC ATGGGGTCCG GCATGGGCGT GCAGCTCTTC CAGGGTTTCT GGTTCTCGCG CCCCTCGGTG GTCGAGGCCA AGCTGCTCAC TCCGTCGCAG ACCAACATCC TCCACCTGAT CAACCTCGTG CGGCAGCAGG CCAGCACCGA CGAGATCGAG GAAGTCCTCA AGAAGGACGC GGGCCTGGCC TTCAACCTGA TGCGGCTCAT CAATTCGTCC GGCTTCGGCC TGACCCGCGA AATCACCTCG TTCCGCCAGG CGGTCATGCT GATGGGCCTG AAGAAGCTCT TCCGCTGGGC CGCGCTGCTG CTGACCGCGT CGCGGATCGG CGGCATACCC GCGGCCGTGG GCCACACGGC CGTGGTCCGC GGGCGGCTGA TGGAACTGAT CGCCCAGGAA ACGCTGTCCC AGGAAGACGC AGACCAGGCC TTCGTCGTGG GCATCTTCTC GATGCTGGAC GTGATGCTCA GCATGCCGAT GGAGTCTGCT GTCGGGTTGC TGCACGTGCC CGACTCCGTG GCCGCCGCCC TGCTGCGCCG CGAAGGCGTC CTCGGAGAGT TGCTGCGCCT CGCCGAAGCC TGCGAGTCGA GCGACGACGC CCTCTTCGAC CAGGCGGCCA CCACCCTGCA CCTCGCCAGC CAGCAGATCA ACTGGGCCCA CCTGCAGGCC CTGGCCTGGG CCGACCAGAT GGCGGACTGA
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Protein sequence | MHPNPPTMTP QGPAGTAPGA MIARQAIVNG QHSVIGYELF NRSRAGVAHT AATDVFLVFT ALSHAGTEEL VGKKLIFVNC THESLAGGHL ELVDPDKVVL EIPPLGHAAA AEVGTRLPIL QALRERGFHL AFNHTVLESA YAPWLPLADY IKLDLSLLAP EQLAVLVKYA GRHSRAELIA EKVETAQQYD MGSGMGVQLF QGFWFSRPSV VEAKLLTPSQ TNILHLINLV RQQASTDEIE EVLKKDAGLA FNLMRLINSS GFGLTREITS FRQAVMLMGL KKLFRWAALL LTASRIGGIP AAVGHTAVVR GRLMELIAQE TLSQEDADQA FVVGIFSMLD VMLSMPMESA VGLLHVPDSV AAALLRREGV LGELLRLAEA CESSDDALFD QAATTLHLAS QQINWAHLQA LAWADQMAD
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