Gene Aave_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1300 
Symbol 
ID4666945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1426960 
End bp1429056 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content73% 
IMG OID639822494 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_969665 
Protein GI120609987 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0863563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAG AGCCAGCCCT CCCGCGCCGC CCGATCCGCG ATCTTCCGGA CGAACTGATC 
AGCCAGATCG CCGCGGGCGA AGTGGTGGAG CGGCCCGCGT CGGCCGTGCG CGAACTCGTG
GACAACGCGC TGGATGCAGG CGCCCGGCAG ATCACCGTGC GGCTGCTGGC CGGCGGCGTC
CGCCTGATCG CGGTGGAGGA CGACGGCTGC GGCATCCCGC CCGAGGAACT GCCGGTGGCG
CTGCGCCGCC ACGCGACCAG CAAGATCACC AATCTGCACG ACCTGGAGTC GGTGGCGACC
ATGGGCTTTC GCGGCGAGGC GCTGGCCGCC ATCGCGTCGG TCTCGGAGAT GGCCCTGCTG
TCGCGGACCG AGGAGCAGCC CACGGCCTTC CTGCTCGACG CGCGCAGCGG CGAGCTGCGC
CCCGCGGCGC GCGCACGCGG CACCACGGTG GAAGTGAAGG AGCTGTTCTT CTCCACACCC
GCGCGGCGCA AGTTCCTGAA GACCGATGCG ACGGAACTGG CGCATTGCAT CGAGGCCGTG
CGCCGCCACG CGCTGGCGCG GCCGGACGTC GGGTTCGCGA TCTGGCACGA AGGCAAGCTG
GTCGAGCAAT GGCGCGCGGC GCTCGTCCCC CCCGCGGCCT CGGCGGACGG CACCGTGGAC
GATGCGGCGC TGGAGGAGGC GCTGGCGCGC CGTCTGTCCG ACGTGCTGGG CGAGGACTTC
CTGGCCGAAT CGATCGCCGT GCGGCACCGC TCCGGGCCGG TGACGGTCAC CGGGAGGGCC
GGGCTGCCGG ACGCCGCGCG CTCGCGCGCC GATCAGCAGT TCTGCTACGT CAACGGCCGG
TTCGTGCGCG ACAAGGTGCT CACGCATGCG GCCCGCAGCG CCTACGAGGA CGTGCTGCAC
GGGCAGAAGC AGCCGGTGTA TGCGCTCTAT GTGGCGATCG ATCCCATGCG GGTGGACGTG
AACGTGCACC CCACCAAGAT CGAGGTGCGC TTCCGCGACA GCCGCGAAGT CCACCAGGCC
GTGCGGCATG CGGTGGAGAA CGCCCTGGCG GCCCCCCGCG CGCAAGCGCT GGCGGCCGCC
GCGCAAGGCG CTGCCGAAGC GGGCGCGCCC GCCACGGATT CGCCGGCGCC TCCCACTGCC
CGCGTGGCGC CGCCCGCCGC CCTGCCCCGG CAGGCCGCGA TGCATTTCGA TGCCCGCCCC
GGGCACCGCG TCACCGACCT GGAAGCGCTC TGGGGCCGCA AGGACACCGC GCCCTCCACA
CGGCCTGACG GCACCACGGA CTTCGCGCCG CCCCCTGCAC CGCATGCGCC GCTGTCTTCC
GCCGCTGCAC CGGGGGGGGC CGCCACCGTG CAGGAGGCTT CCCCGGCCTA TGCCCCGGCC
GGCGGTGCCC TGCCGGCCGT GGATACGCCC GCGGCCCCGC AGGGAGGCGC GCCGGACGGC
CCTGGCGCCT TCGCGGCAGT GCCCGACGCC CCTGCGCAGG CCGCGGCACC TTCCAGTGCC
GAGCCGGCAG TCTGGCCGCT GGGGCGCGCG GTGGCCCAGA TCCACGGCGT ATACATCCTG
GCCGAGAATG CCCAGGGCAT GGTGATCGTG GACATGCACG CGGCGCACGA GCGCATCGTG
TACGAGCGCC TCAAGGCCCA GGTGGACGCC AGCGAGCGCA TCGCGAGCCA GCCGCTGCTG
ATTCCCGCGA CATTCGCCGC CACGCCCGAG GAAGTGGCCA CGGCGGAAGC CCATGCCGAC
ACGCTCGACA TGCTCGGCCT CGAAGTCTCG CCCTTCTCGC CCCGCACGCT GGCGGTGCGC
GCCGTGCCCA CCTCGCTCGC GCAGGGCGAT GCGGTGGAAC TGGCGCGCAG CGTGCTCGCG
GAGCTGGCGG CGCACGATGC CACCACCGTG GTGCAGCGGG CCCGCAACGA GATCCTGGGC
ACCATGGCCT GCCACGGCGC GGTGCGCGCG CACCGGCGGC TGACGCTGGA CGAGATGAAC
GCGCTGCTGC GACAGATGGA AGTGACGGAA CGCTCCGACC AATGCAACCA TGGCCGGCCC
ACGTGGCGGC AACTGTCGAT GCGCGAACTG GACGCGCTGT TCCTGCGCGG ACGCTGA
 
Protein sequence
MTPEPALPRR PIRDLPDELI SQIAAGEVVE RPASAVRELV DNALDAGARQ ITVRLLAGGV 
RLIAVEDDGC GIPPEELPVA LRRHATSKIT NLHDLESVAT MGFRGEALAA IASVSEMALL
SRTEEQPTAF LLDARSGELR PAARARGTTV EVKELFFSTP ARRKFLKTDA TELAHCIEAV
RRHALARPDV GFAIWHEGKL VEQWRAALVP PAASADGTVD DAALEEALAR RLSDVLGEDF
LAESIAVRHR SGPVTVTGRA GLPDAARSRA DQQFCYVNGR FVRDKVLTHA ARSAYEDVLH
GQKQPVYALY VAIDPMRVDV NVHPTKIEVR FRDSREVHQA VRHAVENALA APRAQALAAA
AQGAAEAGAP ATDSPAPPTA RVAPPAALPR QAAMHFDARP GHRVTDLEAL WGRKDTAPST
RPDGTTDFAP PPAPHAPLSS AAAPGGAATV QEASPAYAPA GGALPAVDTP AAPQGGAPDG
PGAFAAVPDA PAQAAAPSSA EPAVWPLGRA VAQIHGVYIL AENAQGMVIV DMHAAHERIV
YERLKAQVDA SERIASQPLL IPATFAATPE EVATAEAHAD TLDMLGLEVS PFSPRTLAVR
AVPTSLAQGD AVELARSVLA ELAAHDATTV VQRARNEILG TMACHGAVRA HRRLTLDEMN
ALLRQMEVTE RSDQCNHGRP TWRQLSMREL DALFLRGR