| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1282 |
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| Symbol | |
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| ID | 4669578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1407413 |
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| End bp | 1408633 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639822476 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_969647 |
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| Protein GI | 120609969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0780459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.651455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC ACCCACGCAC CATCGCGACC TTCAAGACCC TCGCCGTGGC GCTCGGCCTC
GCCGGCCTGT GCGCCGCCCC GGTCGTGCAG GCGCAGGACG GCAAGGTGAA GATCGGCTTC
ATCACCGACA TGTCGAGCCT GTATGCGGAT GTGGAGGGCA AGAACGGCGC GGTGGCGATC
CAGATGGCGA TCGACGACTT CGGCGGCAAG GTGCTGGGCA TGCCGATCGA ACTGGTTTCC
GCCGACCACC AGAACAAGGC CGACATCGCG GCCAGCAAGG CGCGCGAGTG GATCGACACG
CAGGGGCTGA CCATGCTCTT CGGCGGCACC AACTCGGGCA CGGCCCTGGC CATGGCCAAG
GTGGCGCAGG AGAAGAAGCG CGTCTTCATC GTGAACGGCG CCGGCACCTC GGCACTGACC
AACGAGCAGT GCAGCCCCTA CACCGTGCAA TACGCCTACG ACACCGTGGC GCTGGCCAAG
GGCACGGGCG GCGCGGTGGT GCAGCAGGGC GGCAGGGACT GGTTCTTCCT GACGGCCGAC
TATGCCTTCG GCGCCGCGCT GGAGGCCGAC ACGGCCAAGG TGGTGAAGGA AAAGGGCGGC
CGCGTGCTGG GCAGCGTGAA GCATCCGCTC AATGCGTCGG ACTTCTCGTC CTTCCTGCTG
CAGGCGCAGA ACTCCAAGGC GCAGATCCTG GGCCTGGCCA ACGCGGGCGG CGACACCATC
AACGCCATCA AGGCCGCGCG CGAGTTCGGC ATCAACAAGA GCATGAAGAT GGCGGGGCTG
CTCGTGTTCC TGACGGACAT CCACAGCCTG GGCCTGAAGA ACACGGAAGG CCTGCTGCTC
ACGACCAGCT GGGACTGGAA CCTCGACGAC AAGACGCGCG CCTTCGGCCG CAAGTTCTTC
GCCAAGACCA AGCGCATGCC CACGGACATC CAGGCGGCCG ACTATTCGGC CACCATGAAC
TACCTCAAGG CGGTGGAAGC CGCCAAGAGC ACGGACGCCG ACAAGGTGAT GGAAAAGCTC
AAGTCCACGC CCATCGACGA CTTCTACGCC AAGGGCAGCA TCCGCCCGGA CGGCCGCTTC
GCGCACGACA TGTACCTGAT GCAGGTGAAG TCGCCCGCCG AATCCAAGGA GCCGTGGGAC
TACTACAAGG TGGTCGCCAG GCTGCCCGCC GACCAGGTGT GGACCACCAA GGCCGAAAGC
AAGTGCGCGC TCTGGAAGTG A
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| Protein sequence | MKKHPRTIAT FKTLAVALGL AGLCAAPVVQ AQDGKVKIGF ITDMSSLYAD VEGKNGAVAI
QMAIDDFGGK VLGMPIELVS ADHQNKADIA ASKAREWIDT QGLTMLFGGT NSGTALAMAK
VAQEKKRVFI VNGAGTSALT NEQCSPYTVQ YAYDTVALAK GTGGAVVQQG GRDWFFLTAD
YAFGAALEAD TAKVVKEKGG RVLGSVKHPL NASDFSSFLL QAQNSKAQIL GLANAGGDTI
NAIKAAREFG INKSMKMAGL LVFLTDIHSL GLKNTEGLLL TTSWDWNLDD KTRAFGRKFF
AKTKRMPTDI QAADYSATMN YLKAVEAAKS TDADKVMEKL KSTPIDDFYA KGSIRPDGRF
AHDMYLMQVK SPAESKEPWD YYKVVARLPA DQVWTTKAES KCALWK
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